Information for 4-AAAHRGCTCT (Motif 4)


Reverse Opposite:

p-value:1e-1012
log p-value:-2.332e+03
Information Content per bp:1.481
Number of Target Sequences with motif55438.0
Percentage of Target Sequences with motif55.25%
Number of Background Sequences with motif43397.1
Percentage of Background Sequences with motif44.50%
Average Position of motif in Targets100.1 +/- 55.6bp
Average Position of motif in Background99.6 +/- 63.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:AAAHRGCTCT
----NGCTN-

MSC/MA0665.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAAHRGCTCT-
-AACAGCTGTT

Tcf21/MA0832.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAAHRGCTCT---
GCAACAGCTGTTGT

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AAAHRGCTCT-
-----GCTCCG

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAHRGCTCT
BAACAGCTGT

TFAP4/MA0691.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAHRGCTCT-
-AACAGCTGAT

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AAAHRGCTCT-
GAAAAAATTGCAAGG

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AAAHRGCTCT------
----GGCTCYAKCAYC

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AAAHRGCTCT
KCCAAAAATAGC---

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAAHRGCTCT
-AACAGCTG-