Homer Known Motif Enrichment Results (/oak/stanford/groups/akundaje/projects/alzheimers_parkinsons/pseudobulk/homer/background_genome_overlap/Cluster12)

Rank	Motif	Name	P-value	log P-pvalue	q-value (Benjamini)	# Target Sequences with Motif	% of Targets Sequences with Motif	# Background Sequences with Motif	% of Background Sequences with Motif	Motif File	PDF
1		CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	1e-5282	-1.216e+04	0.0000	8854.0	8.82%	926.3	0.95%	motif file (matrix)	pdf
2		BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	1e-3049	-7.022e+03	0.0000	9424.0	9.39%	2065.8	2.12%	motif file (matrix)	pdf
3		SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	1e-1116	-2.571e+03	0.0000	60608.0	60.40%	47908.9	49.13%	motif file (matrix)	pdf
4		Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	1e-998	-2.298e+03	0.0000	22060.0	21.98%	13703.6	14.05%	motif file (matrix)	pdf
5		Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	1e-981	-2.259e+03	0.0000	19305.0	19.24%	11565.8	11.86%	motif file (matrix)	pdf
6		Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	1e-959	-2.209e+03	0.0000	18210.0	18.15%	10776.8	11.05%	motif file (matrix)	pdf
7		NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	1e-934	-2.151e+03	0.0000	27099.0	27.01%	18096.8	18.56%	motif file (matrix)	pdf
8		Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	1e-932	-2.148e+03	0.0000	19609.0	19.54%	11962.9	12.27%	motif file (matrix)	pdf
9		Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	1e-813	-1.873e+03	0.0000	27225.0	27.13%	18707.1	19.18%	motif file (matrix)	pdf
10		Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	1e-729	-1.681e+03	0.0000	26913.0	26.82%	18815.7	19.29%	motif file (matrix)	pdf
11		NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	1e-724	-1.667e+03	0.0000	14200.0	14.15%	8403.7	8.62%	motif file (matrix)	pdf
12		MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	1e-724	-1.667e+03	0.0000	18685.0	18.62%	11958.9	12.26%	motif file (matrix)	pdf
13		MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	1e-712	-1.640e+03	0.0000	15210.0	15.16%	9228.7	9.46%	motif file (matrix)	pdf
14		Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	1e-681	-1.569e+03	0.0000	13052.0	13.01%	7654.7	7.85%	motif file (matrix)	pdf
15		RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	1e-601	-1.385e+03	0.0000	2175.0	2.17%	534.9	0.55%	motif file (matrix)	pdf
16		Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	1e-566	-1.304e+03	0.0000	18882.0	18.82%	12765.4	13.09%	motif file (matrix)	pdf
17		Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	1e-550	-1.269e+03	0.0000	2263.0	2.26%	616.6	0.63%	motif file (matrix)	pdf
18		Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	1e-524	-1.208e+03	0.0000	12648.0	12.60%	7871.5	8.07%	motif file (matrix)	pdf
19		X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	1e-480	-1.106e+03	0.0000	2277.0	2.27%	690.0	0.71%	motif file (matrix)	pdf
20		Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	1e-478	-1.103e+03	0.0000	27445.0	27.35%	20592.5	21.12%	motif file (matrix)	pdf
21		NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	1e-446	-1.027e+03	0.0000	7303.0	7.28%	4038.6	4.14%	motif file (matrix)	pdf
22		Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	1e-427	-9.845e+02	0.0000	37166.0	37.04%	29733.4	30.49%	motif file (matrix)	pdf
23		Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	1e-417	-9.615e+02	0.0000	12874.0	12.83%	8475.8	8.69%	motif file (matrix)	pdf
24		Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	1e-374	-8.614e+02	0.0000	7257.0	7.23%	4220.4	4.33%	motif file (matrix)	pdf
25		Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	1e-360	-8.309e+02	0.0000	6575.0	6.55%	3750.2	3.85%	motif file (matrix)	pdf
26		Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	1e-349	-8.051e+02	0.0000	39343.0	39.21%	32356.1	33.18%	motif file (matrix)	pdf
27		Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	1e-348	-8.017e+02	0.0000	3382.0	3.37%	1528.6	1.57%	motif file (matrix)	pdf
28		AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	1e-317	-7.315e+02	0.0000	8576.0	8.55%	5441.3	5.58%	motif file (matrix)	pdf
29		Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	1e-310	-7.155e+02	0.0000	7615.0	7.59%	4713.5	4.83%	motif file (matrix)	pdf
30		Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	1e-301	-6.951e+02	0.0000	44739.0	44.59%	37860.8	38.82%	motif file (matrix)	pdf
31		Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	1e-276	-6.377e+02	0.0000	4132.0	4.12%	2203.2	2.26%	motif file (matrix)	pdf
32		BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	1e-269	-6.204e+02	0.0000	7264.0	7.24%	4597.9	4.71%	motif file (matrix)	pdf
33		Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	1e-268	-6.175e+02	0.0000	19677.0	19.61%	15093.9	15.48%	motif file (matrix)	pdf
34		Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	1e-264	-6.083e+02	0.0000	2958.0	2.95%	1417.4	1.45%	motif file (matrix)	pdf
35		Oct6(POU,Homeobox)/NPC-Oct6-ChIP-Seq(GSE35496)/Homer	1e-241	-5.552e+02	0.0000	5202.0	5.18%	3103.1	3.18%	motif file (matrix)	pdf
36		Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	1e-240	-5.549e+02	0.0000	4415.0	4.40%	2512.7	2.58%	motif file (matrix)	pdf
37		AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	1e-240	-5.547e+02	0.0000	16036.0	15.98%	12090.7	12.40%	motif file (matrix)	pdf
38		Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	1e-235	-5.416e+02	0.0000	3137.0	3.13%	1606.7	1.65%	motif file (matrix)	pdf
39		MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	1e-226	-5.218e+02	0.0000	18087.0	18.02%	13991.9	14.35%	motif file (matrix)	pdf
40		HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	1e-222	-5.125e+02	0.0000	30214.0	30.11%	25002.6	25.64%	motif file (matrix)	pdf
41		Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	1e-220	-5.069e+02	0.0000	4007.0	3.99%	2274.5	2.33%	motif file (matrix)	pdf
42		BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	1e-212	-4.888e+02	0.0000	15344.0	15.29%	11685.6	11.98%	motif file (matrix)	pdf
43		MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	1e-208	-4.810e+02	0.0000	10036.0	10.00%	7149.2	7.33%	motif file (matrix)	pdf
44		ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	1e-204	-4.708e+02	0.0000	7790.0	7.76%	5308.5	5.44%	motif file (matrix)	pdf
45		Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	1e-197	-4.539e+02	0.0000	2712.0	2.70%	1403.7	1.44%	motif file (matrix)	pdf
46		Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	1e-162	-3.750e+02	0.0000	31746.0	31.64%	27048.7	27.74%	motif file (matrix)	pdf
47		NFY(CCAAT)/Promoter/Homer	1e-156	-3.604e+02	0.0000	8706.0	8.68%	6338.8	6.50%	motif file (matrix)	pdf
48		Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	1e-148	-3.426e+02	0.0000	31832.0	31.72%	27294.5	27.99%	motif file (matrix)	pdf
49		Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	1e-147	-3.396e+02	0.0000	13225.0	13.18%	10317.0	10.58%	motif file (matrix)	pdf
50		NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	1e-144	-3.330e+02	0.0000	9035.0	9.00%	6695.3	6.87%	motif file (matrix)	pdf
51		AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	1e-141	-3.267e+02	0.0000	40888.0	40.75%	35939.4	36.85%	motif file (matrix)	pdf
52		Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	1e-128	-2.951e+02	0.0000	5377.0	5.36%	3719.7	3.81%	motif file (matrix)	pdf
53		RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	1e-126	-2.916e+02	0.0000	1587.0	1.58%	793.1	0.81%	motif file (matrix)	pdf
54		E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	1e-126	-2.913e+02	0.0000	24253.0	24.17%	20511.2	21.03%	motif file (matrix)	pdf
55		Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	1e-121	-2.800e+02	0.0000	911.0	0.91%	363.3	0.37%	motif file (matrix)	pdf
56		ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	1e-118	-2.739e+02	0.0000	18146.0	18.08%	14996.2	15.38%	motif file (matrix)	pdf
57		Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	1e-118	-2.727e+02	0.0000	8616.0	8.59%	6518.3	6.68%	motif file (matrix)	pdf
58		Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	1e-117	-2.705e+02	0.0000	9374.0	9.34%	7182.3	7.37%	motif file (matrix)	pdf
59		Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	1e-114	-2.636e+02	0.0000	19860.0	19.79%	16610.7	17.03%	motif file (matrix)	pdf
60		Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	1e-109	-2.511e+02	0.0000	7468.0	7.44%	5597.8	5.74%	motif file (matrix)	pdf
61		NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	1e-103	-2.379e+02	0.0000	942.0	0.94%	413.1	0.42%	motif file (matrix)	pdf
62		Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	1e-96	-2.230e+02	0.0000	9234.0	9.20%	7227.5	7.41%	motif file (matrix)	pdf
63		PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	1e-96	-2.224e+02	0.0000	6091.0	6.07%	4506.9	4.62%	motif file (matrix)	pdf
64		Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	1e-92	-2.139e+02	0.0000	18610.0	18.55%	15721.8	16.12%	motif file (matrix)	pdf
65		Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	1e-88	-2.036e+02	0.0000	6727.0	6.70%	5110.9	5.24%	motif file (matrix)	pdf
66		Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	1e-88	-2.035e+02	0.0000	794.0	0.79%	346.7	0.36%	motif file (matrix)	pdf
67		PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	1e-87	-2.012e+02	0.0000	21628.0	21.55%	18579.8	19.05%	motif file (matrix)	pdf
68		STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	1e-85	-1.959e+02	0.0000	9280.0	9.25%	7372.2	7.56%	motif file (matrix)	pdf
69		SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	1e-84	-1.953e+02	0.0000	11166.0	11.13%	9054.5	9.28%	motif file (matrix)	pdf
70		Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	1e-80	-1.856e+02	0.0000	13366.0	13.32%	11082.1	11.36%	motif file (matrix)	pdf
71		Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	1e-79	-1.841e+02	0.0000	2580.0	2.57%	1690.0	1.73%	motif file (matrix)	pdf
72		Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	1e-79	-1.831e+02	0.0000	10360.0	10.32%	8387.9	8.60%	motif file (matrix)	pdf
73		ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	1e-79	-1.824e+02	0.0000	11676.0	11.64%	9571.6	9.82%	motif file (matrix)	pdf
74		Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	1e-76	-1.753e+02	0.0000	5453.0	5.43%	4105.7	4.21%	motif file (matrix)	pdf
75		ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	1e-75	-1.736e+02	0.0000	15465.0	15.41%	13058.5	13.39%	motif file (matrix)	pdf
76		Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	1e-64	-1.484e+02	0.0000	15358.0	15.31%	13106.7	13.44%	motif file (matrix)	pdf
77		OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	1e-64	-1.479e+02	0.0000	1877.0	1.87%	1203.2	1.23%	motif file (matrix)	pdf
78		Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	1e-63	-1.465e+02	0.0000	3385.0	3.37%	2435.7	2.50%	motif file (matrix)	pdf
79		Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	1e-63	-1.461e+02	0.0000	17496.0	17.44%	15093.6	15.48%	motif file (matrix)	pdf
80		Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	1e-62	-1.441e+02	0.0000	9341.0	9.31%	7653.4	7.85%	motif file (matrix)	pdf
81		Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	1e-61	-1.419e+02	0.0000	6588.0	6.57%	5212.2	5.34%	motif file (matrix)	pdf
82		CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	1e-58	-1.337e+02	0.0000	344.0	0.34%	121.9	0.12%	motif file (matrix)	pdf
83		Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	1e-57	-1.329e+02	0.0000	1155.0	1.15%	673.2	0.69%	motif file (matrix)	pdf
84		Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	1e-57	-1.326e+02	0.0000	10546.0	10.51%	8799.7	9.02%	motif file (matrix)	pdf
85		MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	1e-54	-1.265e+02	0.0000	2853.0	2.84%	2044.5	2.10%	motif file (matrix)	pdf
86		ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	1e-54	-1.252e+02	0.0000	6706.0	6.68%	5386.5	5.52%	motif file (matrix)	pdf
87		GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	1e-53	-1.237e+02	0.0000	9858.0	9.82%	8223.5	8.43%	motif file (matrix)	pdf
88		EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	1e-51	-1.193e+02	0.0000	7450.0	7.42%	6076.4	6.23%	motif file (matrix)	pdf
89		EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	1e-48	-1.111e+02	0.0000	6428.0	6.41%	5202.7	5.34%	motif file (matrix)	pdf
90		RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	1e-48	-1.111e+02	0.0000	4100.0	4.09%	3154.7	3.23%	motif file (matrix)	pdf
91		Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	1e-46	-1.077e+02	0.0000	17615.0	17.55%	15473.9	15.87%	motif file (matrix)	pdf
92		Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	1e-46	-1.072e+02	0.0000	2507.0	2.50%	1807.9	1.85%	motif file (matrix)	pdf
93		Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	1e-44	-1.014e+02	0.0000	3182.0	3.17%	2396.2	2.46%	motif file (matrix)	pdf
94		Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	1e-43	-1.005e+02	0.0000	1851.0	1.84%	1281.2	1.31%	motif file (matrix)	pdf
95		OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	1e-43	-1.003e+02	0.0000	284.0	0.28%	106.2	0.11%	motif file (matrix)	pdf
96		Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	1e-42	-9.810e+01	0.0000	23346.0	23.27%	20933.8	21.47%	motif file (matrix)	pdf
97		CRE(bZIP)/Promoter/Homer	1e-42	-9.801e+01	0.0000	2343.0	2.33%	1695.5	1.74%	motif file (matrix)	pdf
98		Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	1e-41	-9.637e+01	0.0000	16515.0	16.46%	14535.7	14.91%	motif file (matrix)	pdf
99		ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	1e-40	-9.294e+01	0.0000	2557.0	2.55%	1890.0	1.94%	motif file (matrix)	pdf
100		Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	1e-39	-9.178e+01	0.0000	6564.0	6.54%	5417.6	5.56%	motif file (matrix)	pdf
101		PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	1e-38	-8.897e+01	0.0000	2115.0	2.11%	1529.8	1.57%	motif file (matrix)	pdf
102		FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	1e-36	-8.399e+01	0.0000	3605.0	3.59%	2824.2	2.90%	motif file (matrix)	pdf
103		Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	1e-35	-8.234e+01	0.0000	2455.0	2.45%	1836.6	1.88%	motif file (matrix)	pdf
104		Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	1e-35	-8.198e+01	0.0000	1470.0	1.46%	1013.5	1.04%	motif file (matrix)	pdf
105		GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	1e-35	-8.158e+01	0.0000	2231.0	2.22%	1648.9	1.69%	motif file (matrix)	pdf
106		EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	1e-35	-8.142e+01	0.0000	13215.0	13.17%	11580.6	11.88%	motif file (matrix)	pdf
107		Sp1(Zf)/Promoter/Homer	1e-34	-7.968e+01	0.0000	4833.0	4.82%	3927.0	4.03%	motif file (matrix)	pdf
108		PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	1e-34	-7.961e+01	0.0000	13162.0	13.12%	11545.2	11.84%	motif file (matrix)	pdf
109		HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	1e-33	-7.680e+01	0.0000	5900.0	5.88%	4898.4	5.02%	motif file (matrix)	pdf
110		ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	1e-33	-7.624e+01	0.0000	5829.0	5.81%	4837.1	4.96%	motif file (matrix)	pdf
111		GFY(?)/Promoter/Homer	1e-33	-7.621e+01	0.0000	882.0	0.88%	555.7	0.57%	motif file (matrix)	pdf
112		ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	1e-32	-7.372e+01	0.0000	8543.0	8.51%	7321.4	7.51%	motif file (matrix)	pdf
113		Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	1e-31	-7.257e+01	0.0000	4445.0	4.43%	3615.3	3.71%	motif file (matrix)	pdf
114		MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	1e-31	-7.235e+01	0.0000	9048.0	9.02%	7794.3	7.99%	motif file (matrix)	pdf
115		Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	1e-31	-7.201e+01	0.0000	8093.0	8.07%	6920.4	7.10%	motif file (matrix)	pdf
116		GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	1e-30	-6.967e+01	0.0000	1379.0	1.37%	968.7	0.99%	motif file (matrix)	pdf
117		CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	1e-28	-6.496e+01	0.0000	2622.0	2.61%	2040.9	2.09%	motif file (matrix)	pdf
118		JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	1e-27	-6.339e+01	0.0000	858.0	0.86%	560.4	0.57%	motif file (matrix)	pdf
119		E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	1e-25	-5.898e+01	0.0000	6714.0	6.69%	5744.0	5.89%	motif file (matrix)	pdf
120		NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	1e-25	-5.887e+01	0.0000	2034.0	2.03%	1553.7	1.59%	motif file (matrix)	pdf
121		RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	1e-25	-5.768e+01	0.0000	9536.0	9.50%	8354.4	8.57%	motif file (matrix)	pdf
122		STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	1e-24	-5.689e+01	0.0000	2468.0	2.46%	1937.6	1.99%	motif file (matrix)	pdf
123		Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	1e-23	-5.298e+01	0.0000	2897.0	2.89%	2331.9	2.39%	motif file (matrix)	pdf
124		ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	1e-22	-5.230e+01	0.0000	1115.0	1.11%	794.9	0.82%	motif file (matrix)	pdf
125		PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	1e-22	-5.197e+01	0.0000	900.0	0.90%	618.4	0.63%	motif file (matrix)	pdf
126		STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	1e-21	-5.005e+01	0.0000	2919.0	2.91%	2364.9	2.43%	motif file (matrix)	pdf
127		Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	1e-21	-4.965e+01	0.0000	5398.0	5.38%	4603.9	4.72%	motif file (matrix)	pdf
128		CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	1e-21	-4.928e+01	0.0000	5288.0	5.27%	4505.5	4.62%	motif file (matrix)	pdf
129		Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	1e-21	-4.876e+01	0.0000	2542.0	2.53%	2036.1	2.09%	motif file (matrix)	pdf
130		IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	1e-21	-4.876e+01	0.0000	931.0	0.93%	651.4	0.67%	motif file (matrix)	pdf
131		TATA-Box(TBP)/Promoter/Homer	1e-20	-4.766e+01	0.0000	10698.0	10.66%	9523.5	9.77%	motif file (matrix)	pdf
132		STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	1e-20	-4.694e+01	0.0000	4759.0	4.74%	4038.2	4.14%	motif file (matrix)	pdf
133		EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	1e-20	-4.676e+01	0.0000	12187.0	12.15%	10926.4	11.20%	motif file (matrix)	pdf
134		E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	1e-19	-4.470e+01	0.0000	5439.0	5.42%	4674.6	4.79%	motif file (matrix)	pdf
135		GFY-Staf(?,Zf)/Promoter/Homer	1e-19	-4.444e+01	0.0000	699.0	0.70%	472.8	0.48%	motif file (matrix)	pdf
136		GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	1e-19	-4.388e+01	0.0000	1181.0	1.18%	873.6	0.90%	motif file (matrix)	pdf
137		CHR(?)/Hela-CellCycle-Expression/Homer	1e-18	-4.275e+01	0.0000	5184.0	5.17%	4454.0	4.57%	motif file (matrix)	pdf
138		E-box(bHLH)/Promoter/Homer	1e-18	-4.230e+01	0.0000	835.0	0.83%	588.2	0.60%	motif file (matrix)	pdf
139		Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	1e-18	-4.224e+01	0.0000	5481.0	5.46%	4730.8	4.85%	motif file (matrix)	pdf
140		ETS(ETS)/Promoter/Homer	1e-18	-4.216e+01	0.0000	3493.0	3.48%	2919.9	2.99%	motif file (matrix)	pdf
141		PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	1e-17	-4.116e+01	0.0000	1760.0	1.75%	1381.5	1.42%	motif file (matrix)	pdf
142		ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	1e-17	-4.020e+01	0.0000	7008.0	6.98%	6155.3	6.31%	motif file (matrix)	pdf
143		USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	1e-17	-3.972e+01	0.0000	4605.0	4.59%	3945.9	4.05%	motif file (matrix)	pdf
144		EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	1e-17	-3.952e+01	0.0000	2326.0	2.32%	1888.0	1.94%	motif file (matrix)	pdf
145		OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	1e-17	-3.929e+01	0.0000	148.0	0.15%	65.1	0.07%	motif file (matrix)	pdf
146		ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	1e-16	-3.873e+01	0.0000	9481.0	9.45%	8472.2	8.69%	motif file (matrix)	pdf
147		CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	1e-16	-3.797e+01	0.0000	7024.0	7.00%	6189.5	6.35%	motif file (matrix)	pdf
148		Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	1e-15	-3.545e+01	0.0000	1937.0	1.93%	1561.7	1.60%	motif file (matrix)	pdf
149		ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	1e-15	-3.541e+01	0.0000	15604.0	15.55%	14281.3	14.64%	motif file (matrix)	pdf
150		IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	1e-15	-3.529e+01	0.0000	3843.0	3.83%	3279.4	3.36%	motif file (matrix)	pdf
151		c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	1e-15	-3.476e+01	0.0000	4695.0	4.68%	4063.8	4.17%	motif file (matrix)	pdf
152		PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	1e-14	-3.347e+01	0.0000	1704.0	1.70%	1364.2	1.40%	motif file (matrix)	pdf
153		n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	1e-14	-3.330e+01	0.0000	7012.0	6.99%	6220.6	6.38%	motif file (matrix)	pdf
154		Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	1e-13	-3.072e+01	0.0000	2777.0	2.77%	2339.2	2.40%	motif file (matrix)	pdf
155		Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	1e-13	-3.019e+01	0.0000	6479.0	6.46%	5753.5	5.90%	motif file (matrix)	pdf
156		IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	1e-12	-2.985e+01	0.0000	1178.0	1.17%	918.4	0.94%	motif file (matrix)	pdf
157		STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	1e-12	-2.983e+01	0.0000	4518.0	4.50%	3939.0	4.04%	motif file (matrix)	pdf
158		Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	1e-12	-2.963e+01	0.0000	2187.0	2.18%	1813.9	1.86%	motif file (matrix)	pdf
159		Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	1e-12	-2.830e+01	0.0000	3533.0	3.52%	3044.9	3.12%	motif file (matrix)	pdf
160		HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	1e-12	-2.814e+01	0.0000	8662.0	8.63%	7817.1	8.02%	motif file (matrix)	pdf
161		E2F(E2F)/Hela-CellCycle-Expression/Homer	1e-11	-2.761e+01	0.0000	555.0	0.55%	394.3	0.40%	motif file (matrix)	pdf
162		IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	1e-11	-2.685e+01	0.0000	939.0	0.94%	722.6	0.74%	motif file (matrix)	pdf
163		Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	1e-11	-2.682e+01	0.0000	3056.0	3.05%	2618.7	2.69%	motif file (matrix)	pdf
164		PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	1e-11	-2.582e+01	0.0000	4415.0	4.40%	3877.0	3.98%	motif file (matrix)	pdf
165		NRF(NRF)/Promoter/Homer	1e-10	-2.363e+01	0.0000	2132.0	2.12%	1798.4	1.84%	motif file (matrix)	pdf
166		RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	1e-10	-2.311e+01	0.0000	6218.0	6.20%	5581.4	5.72%	motif file (matrix)	pdf
167		YY1(Zf)/Promoter/Homer	1e-9	-2.253e+01	0.0000	826.0	0.82%	640.6	0.66%	motif file (matrix)	pdf
168		BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	1e-9	-2.236e+01	0.0000	17681.0	17.62%	16457.4	16.88%	motif file (matrix)	pdf
169		RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	1e-9	-2.217e+01	0.0000	6526.0	6.50%	5880.6	6.03%	motif file (matrix)	pdf
170		NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	1e-9	-2.208e+01	0.0000	488.0	0.49%	353.2	0.36%	motif file (matrix)	pdf
171		NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	1e-9	-2.110e+01	0.0000	1476.0	1.47%	1221.4	1.25%	motif file (matrix)	pdf
172		Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	1e-8	-1.967e+01	0.0000	2025.0	2.02%	1726.4	1.77%	motif file (matrix)	pdf
173		FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	1e-7	-1.729e+01	0.0000	6688.0	6.67%	6092.9	6.25%	motif file (matrix)	pdf
174		MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	1e-7	-1.718e+01	0.0000	2870.0	2.86%	2521.4	2.59%	motif file (matrix)	pdf
175		ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	1e-7	-1.702e+01	0.0000	531.0	0.53%	405.1	0.42%	motif file (matrix)	pdf
176		SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	1e-6	-1.467e+01	0.0000	2088.0	2.08%	1820.0	1.87%	motif file (matrix)	pdf
177		RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	1e-6	-1.443e+01	0.0000	7110.0	7.09%	6531.2	6.70%	motif file (matrix)	pdf
178		ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	1e-6	-1.400e+01	0.0000	839.0	0.84%	688.3	0.71%	motif file (matrix)	pdf
179		ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	1e-5	-1.375e+01	0.0000	1236.0	1.23%	1047.1	1.07%	motif file (matrix)	pdf
180		Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	1e-5	-1.360e+01	0.0000	7066.0	7.04%	6502.6	6.67%	motif file (matrix)	pdf
181		FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	1e-5	-1.321e+01	0.0000	9742.0	9.71%	9051.5	9.28%	motif file (matrix)	pdf
182		GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	1e-5	-1.251e+01	0.0000	624.0	0.62%	504.0	0.52%	motif file (matrix)	pdf
183		HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	1e-4	-1.041e+01	0.0001	815.0	0.81%	686.7	0.70%	motif file (matrix)	pdf
184		Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	1e-4	-1.040e+01	0.0001	19963.0	19.89%	18911.4	19.39%	motif file (matrix)	pdf
185		bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	1e-4	-1.006e+01	0.0001	3584.0	3.57%	3263.9	3.35%	motif file (matrix)	pdf
186		E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	1e-4	-9.624e+00	0.0001	1346.0	1.34%	1177.6	1.21%	motif file (matrix)	pdf
187		TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	1e-4	-9.590e+00	0.0001	8442.0	8.41%	7882.6	8.08%	motif file (matrix)	pdf
188		Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	1e-3	-9.010e+00	0.0002	4580.0	4.56%	4219.3	4.33%	motif file (matrix)	pdf
189		ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	1e-3	-8.961e+00	0.0002	3565.0	3.55%	3260.9	3.34%	motif file (matrix)	pdf
190		ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	1e-3	-8.307e+00	0.0004	452.0	0.45%	371.9	0.38%	motif file (matrix)	pdf
191		EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	1e-3	-8.271e+00	0.0004	156.0	0.16%	113.2	0.12%	motif file (matrix)	pdf
192		FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	1e-3	-7.579e+00	0.0008	8263.0	8.23%	7755.0	7.95%	motif file (matrix)	pdf
193		Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	1e-3	-7.578e+00	0.0008	3295.0	3.28%	3025.5	3.10%	motif file (matrix)	pdf
194		Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	1e-3	-7.343e+00	0.0011	1859.0	1.85%	1676.6	1.72%	motif file (matrix)	pdf
195		ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	1e-3	-7.050e+00	0.0014	6436.0	6.41%	6021.2	6.17%	motif file (matrix)	pdf
196		GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	1e-2	-6.614e+00	0.0022	2992.0	2.98%	2753.4	2.82%	motif file (matrix)	pdf
197		PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	1e-2	-6.518e+00	0.0024	782.0	0.78%	682.2	0.70%	motif file (matrix)	pdf
198		GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	1e-2	-6.343e+00	0.0028	568.0	0.57%	487.7	0.50%	motif file (matrix)	pdf
199		HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	1e-2	-5.793e+00	0.0049	1238.0	1.23%	1112.9	1.14%	motif file (matrix)	pdf
200		Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	1e-2	-5.065e+00	0.0101	2055.0	2.05%	1890.1	1.94%	motif file (matrix)	pdf
201		T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	1e-2	-4.855e+00	0.0124	95.0	0.09%	71.6	0.07%	motif file (matrix)	pdf
202		c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	1e-2	-4.794e+00	0.0131	4978.0	4.96%	4679.2	4.80%	motif file (matrix)	pdf