Information for 7-GCWGTCWNTT (Motif 7)


Reverse Opposite:

p-value:1e-825
log p-value:-1.901e+03
Information Content per bp:1.551
Number of Target Sequences with motif46986.0
Percentage of Target Sequences with motif46.82%
Number of Background Sequences with motif36370.4
Percentage of Background Sequences with motif37.30%
Average Position of motif in Targets100.1 +/- 55.6bp
Average Position of motif in Background100.0 +/- 65.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCWGTCWNTT
GCAGTGATTT

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCWGTCWNTT
TGCTGTGATTT

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GCWGTCWNTT--
NNNCAGCTGTCAATATN

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCWGTCWNTT
NGCTN------

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCWGTCWNTT-
AAGCACCTGTCAATAT

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCWGTCWNTT-
GSCTGTCACTCA

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCWGTCWNTT--
ACTTTCACTTTC

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCWGTCWNTT--
NCTGTCAATCAN

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCWGTCWNTT-
AACTAGCTGTCAATAC

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCWGTCWNTT---
TCACTTTCACTTTCN