Information for 23-CGGATTTGTA (Motif 19)


Reverse Opposite:

p-value:1e-115
log p-value:-2.663e+02
Information Content per bp:1.625
Number of Target Sequences with motif7385.0
Percentage of Target Sequences with motif7.36%
Number of Background Sequences with motif5480.8
Percentage of Background Sequences with motif5.62%
Average Position of motif in Targets99.7 +/- 56.8bp
Average Position of motif in Background101.6 +/- 60.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGGATTTGTA
CNGTGATTTN--

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGGATTTGTA--
GGGAATTGTAGT

Dmbx1/MA0883.1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CGGATTTGTA--
TGAACCGGATTAATGAA

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CGGATTTGTA--
TGAACCGGATTAATGAA

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGGATTTGTA--
--CCATTGTTNY

OTX1/MA0711.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGGATTTGTA
CGGATTAN--

PH0138.1_Pitx2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGGATTTGTA---
TGAAGGGATTAATCATC

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CGGATTTGTA
----ATTGTT

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGGATTTGTA
GGGATTANN-

Hoxc9/MA0485.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGGATTTGTA---
NTGATTTATGGCC