Homer de novo Motif Results (caQTL_eQTL_SNPs_plusMinus30bp.HomerDiffOpenResults/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 2466
Total background sequences = 2448
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1 *		1e-3	-7.211e+00	0.89%	0.23%	5.4bp (7.9bp)	PB0101.1_Zic1_1/Jaspar(0.844) More Information \| Similar Motifs Found	motif file (matrix)
2 *		1e-3	-6.939e+00	0.41%	0.04%	2.6bp (0.0bp)	dl/dmmpmm(Down)/fly(0.694) More Information \| Similar Motifs Found	motif file (matrix)
3 *		1e-2	-6.381e+00	0.49%	0.08%	5.8bp (10.6bp)	PB0009.1_E2F3_1/Jaspar(0.699) More Information \| Similar Motifs Found	motif file (matrix)
4 *		1e-2	-6.182e+00	0.57%	0.09%	5.0bp (11.3bp)	NRG1/NRG1_H2O2Hi/[](Harbison)/Yeast(0.686) More Information \| Similar Motifs Found	motif file (matrix)
5 *		1e-2	-6.007e+00	2.03%	1.03%	11.5bp (15.5bp)	ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer(0.742) More Information \| Similar Motifs Found	motif file (matrix)
6 *		1e-2	-5.729e+00	0.77%	0.22%	8.2bp (16.0bp)	Deaf1/dmmpmm(Pollard)/fly(0.715) More Information \| Similar Motifs Found	motif file (matrix)
7 *		1e-2	-5.143e+00	0.65%	0.20%	9.0bp (15.7bp)	PB0076.1_Sp4_1/Jaspar(0.715) More Information \| Similar Motifs Found	motif file (matrix)
8 *		1e-2	-4.855e+00	0.28%	0.04%	7.3bp (0.0bp)	ROX1(MacIsaac)/Yeast(0.722) More Information \| Similar Motifs Found	motif file (matrix)
9 *		1e-2	-4.662e+00	0.81%	0.30%	9.2bp (15.6bp)	ZBTB7B/MA0694.1/Jaspar(0.760) More Information \| Similar Motifs Found	motif file (matrix)
10 *		1e-1	-4.495e+00	0.45%	0.12%	7.7bp (14.1bp)	twi/dmmpmm(Papatsenko)/fly(0.787) More Information \| Similar Motifs Found	motif file (matrix)
11 *		1e-1	-4.161e+00	0.24%	0.04%	6.6bp (0.0bp)	ERF4/MA0992.1/Jaspar(0.816) More Information \| Similar Motifs Found	motif file (matrix)
12 *		1e-1	-3.953e+00	0.41%	0.12%	9.6bp (16.6bp)	ERF109/MA1053.1/Jaspar(0.713) More Information \| Similar Motifs Found	motif file (matrix)
13 *		1e-1	-3.843e+00	0.73%	0.29%	10.9bp (17.7bp)	NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.723) More Information \| Similar Motifs Found	motif file (matrix)
14 *		1e-1	-3.423e+00	0.37%	0.09%	5.1bp (8.4bp)	MET28/MA0332.1/Jaspar(0.722) More Information \| Similar Motifs Found	motif file (matrix)