Information for 4-GCGGCGGCGGCC (Motif 11)


Reverse Opposite:

p-value:1e-1
log p-value:-4.161e+00
Information Content per bp:1.891
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets27.5 +/- 6.6bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERF4/MA0992.1/Jaspar

Match Rank:1
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:GCGGCGGCGGCC
--GGCGGCGG--

CRF2/MA0975.1/Jaspar

Match Rank:2
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:GCGGCGGCGGCC
--GGCGGCGG--

ERF094/MA1049.1/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GCGGCGGCGGCC
-CGGCGGCG---

ERF112/MA1002.1/Jaspar

Match Rank:4
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GCGGCGGCGGCC
-TGGCGGCGGN-

CRF4/MA0976.1/Jaspar

Match Rank:5
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GCGGCGGCGGCC
--GGCGGCGC--

Os05g0497200/MA1034.1/Jaspar

Match Rank:6
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GCGGCGGCGGCC
-CGGCGGCG---

RAP2-6/MA1052.1/Jaspar

Match Rank:7
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GCGGCGGCGGCC
--GGCGGCGC--

ERF096/MA0998.1/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GCGGCGGCGGCC
NNGGCGGCGN--

ERF13/MA1004.1/Jaspar

Match Rank:9
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GCGGCGGCGGCC
-TGGCGGCG---

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:10
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GCGGCGGCGGCC
--GGCGGCG---