Information for 3-CGGGGGTC (Motif 9)


Reverse Opposite:

p-value:1e-2
log p-value:-4.662e+00
Information Content per bp:1.925
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets31.4 +/- 9.2bp
Average Position of motif in Background35.1 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB7B/MA0694.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CGGGGGTC--
TTCGGTGGTCGC

PB0025.1_Glis2_1/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----CGGGGGTC----
NTNTGGGGGGTCNNNA

ZBTB7C/MA0695.1/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CGGGGGTC--
NTCGGTGGTCGC

usp/MA0016.1/Jaspar

Match Rank:4
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CGGGGGTC----
--GGGGTCACGG

AFT2/MA0270.1/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CGGGGGTC
GGGGTGTG

usp/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CGGGGGTC---
--GGGGTCACG

ADR1/Literature(Harbison)/Yeast

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGGGGGTC
-NGGAGG-

ADR1(MacIsaac)/Yeast

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGGGGGTC
-NGGAGG-

PB0201.1_Zfp281_2/Jaspar

Match Rank:9
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGGGTC----
NNNATTGGGGGTNTCCT

ARG80/MA0271.1/Jaspar

Match Rank:10
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CGGGGGTC-
---GCGTCT