Homer de novo Motif Results (../PooledATACData/caQTL_RA_SNPs_closedRisk_openPlusMinus12bp.HomerDiffClosedResults/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 473
Total background sequences = 470
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1 *		1e-3	-8.350e+00	2.54%	0.17%	2.2bp (0.0bp)	CDC5(MYB)/Arabidopsis thaliana/AthaMap(0.636) More Information \| Similar Motifs Found	motif file (matrix)
2 *		1e-3	-7.835e+00	9.73%	4.23%	3.3bp (3.9bp)	SeqBias: polyC-repeat(0.754) More Information \| Similar Motifs Found	motif file (matrix)
3 *		1e-3	-7.789e+00	4.44%	0.99%	3.3bp (5.3bp)	HAT1/MA1024.1/Jaspar(0.746) More Information \| Similar Motifs Found	motif file (matrix)
4 *		1e-2	-6.790e+00	3.17%	0.59%	3.8bp (2.7bp)	snpc-4/MA0544.1/Jaspar(0.587) More Information \| Similar Motifs Found	motif file (matrix)
5 *		1e-2	-6.790e+00	3.17%	0.44%	2.4bp (4.5bp)	TCP23/MA1066.1/Jaspar(0.941) More Information \| Similar Motifs Found	motif file (matrix)
6 *		1e-2	-6.438e+00	7.40%	3.07%	3.9bp (4.7bp)	POL010.1_DCE_S_III/Jaspar(0.755) More Information \| Similar Motifs Found	motif file (matrix)
7 *		1e-2	-6.204e+00	2.96%	0.60%	3.0bp (1.4bp)	grh/dmmpmm(SeSiMCMC)/fly(0.678) More Information \| Similar Motifs Found	motif file (matrix)
8 *		1e-2	-5.768e+00	4.02%	1.23%	3.3bp (4.0bp)	MEIS1/MA0498.2/Jaspar(0.772) More Information \| Similar Motifs Found	motif file (matrix)
9 *		1e-2	-5.626e+00	2.75%	0.56%	3.4bp (1.9bp)	E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer(0.802) More Information \| Similar Motifs Found	motif file (matrix)
10 *		1e-2	-5.626e+00	2.75%	0.53%	2.5bp (1.3bp)	GLN3/MA0307.1/Jaspar(0.591) More Information \| Similar Motifs Found	motif file (matrix)
11 *		1e-2	-5.303e+00	4.86%	1.91%	2.9bp (3.1bp)	YER184C/MA0424.1/Jaspar(0.825) More Information \| Similar Motifs Found	motif file (matrix)
12 *		1e-2	-4.660e+00	4.86%	2.02%	4.0bp (6.3bp)	XBP1(MacIsaac)/Yeast(0.750) More Information \| Similar Motifs Found	motif file (matrix)
13 *		1e-1	-4.402e+00	14.80%	9.90%	4.7bp (5.2bp)	PB0036.1_Irf6_1/Jaspar(0.874) More Information \| Similar Motifs Found	motif file (matrix)
14 *		1e-1	-3.369e+00	4.44%	2.30%	4.5bp (6.3bp)	PHD1(MacIsaac)/Yeast(0.822) More Information \| Similar Motifs Found	motif file (matrix)
15 *		1e-1	-3.076e+00	2.11%	0.67%	3.1bp (4.3bp)	SUT1/SUT1_YPD/[](Harbison)/Yeast(0.794) More Information \| Similar Motifs Found	motif file (matrix)
16 *		1e-1	-2.635e+00	2.54%	1.11%	4.0bp (4.9bp)	MET31(MacIsaac)/Yeast(0.745) More Information \| Similar Motifs Found	motif file (matrix)