Information for 3-GCAGGTGGAG (Motif 9)


Reverse Opposite:

p-value:1e-2
log p-value:-5.626e+00
Information Content per bp:1.822
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets11.1 +/- 3.4bp
Average Position of motif in Background12.7 +/- 1.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGGAG
NNCAGGTGNN-

sna/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GCAGGTGGAG
GCAGGTGG--

PL0002.1_hlh-2::hlh-3/Jaspar

Match Rank:3
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGGTGGAG--
NATNAGCAGGTGTTNNN

esg/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GCAGGTGGAG
NNACAGGTGCNN

sna/MA0086.1/Jaspar

Match Rank:5
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GCAGGTGGAG
-CAGGTG---

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGGAG
NNCAGGTGTN-

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGGAG
NNCAGGTGCG-

PL0011.1_hlh-2::hlh-4/Jaspar

Match Rank:8
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGGTGGAG--
NNNNAGCAGGTGNTATT

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GCAGGTGGAG
-CAGGTGAGG

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GCAGGTGGAG
AACAGGTGT--