Information for 1-TCCTCG (Motif 12)


Reverse Opposite:

p-value:1e-2
log p-value:-4.660e+00
Information Content per bp:1.809
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif4.86%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif2.02%
Average Position of motif in Targets11.1 +/- 4.0bp
Average Position of motif in Background11.5 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

XBP1(MacIsaac)/Yeast

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TCCTCG--
TCCTCGAG

Deaf1/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TCCTCG--
--TTCGGG

Deaf1/MA0185.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TCCTCG--
--TTCGGG

NHP10/MA0344.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCCTCG--
TCCCCGGC

STB2(MacIsaac)/Yeast

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCG
NTTACCCG

XBP1/MA0414.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCCTCG--
-NCTCGAG

OAF1/MA0348.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCG-
TATCTCCGA

CHA4(MacIsaac)/Yeast

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCG--
CTCATCGCA

TOD6/MA0350.1/Jaspar

Match Rank:9
Score:0.66
Offset:-9
Orientation:forward strand
Alignment:---------TCCTCG------
AGGCACAGCTCATCGCGTTTT

REB1/REB1_YPD/61-REB1(Harbison)/Yeast

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCG
TTACCCG