Information for 3-TCCTGKTTCYSG (Motif 7)


Reverse Opposite:

p-value:1e-2
log p-value:-6.204e+00
Information Content per bp:1.680
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets10.3 +/- 3.0bp
Average Position of motif in Background8.0 +/- 1.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

grh/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TCCTGKTTCYSG
--CTGGTTC---

grh/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCCTGKTTCYSG
TACCTGCT-----

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCCTGKTTCYSG
--CTGTTCCTGG

grh/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCCTGKTTCYSG
--CTGGTTTTAT

grh/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCCTGKTTCYSG
--CTGGTT----

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCCTGKTTCYSG
ACTTCCTGTT-----

ttk/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCCTGKTTCYSG
GGTCCTG-------

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCCTGKTTCYSG
ACATCCTGNT-----

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCCTGKTTCYSG
TCCTGTTTACA-

ttk/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGKTTCYSG
GGTCCTGCC-----