Information for 2-GTTTCG (Motif 13)


Reverse Opposite:

p-value:1e-1
log p-value:-4.402e+00
Information Content per bp:1.530
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif14.80%
Number of Background Sequences with motif46.5
Percentage of Background Sequences with motif9.90%
Average Position of motif in Targets10.5 +/- 4.7bp
Average Position of motif in Background10.2 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.87
Offset:-6
Orientation:reverse strand
Alignment:------GTTTCG-----
NNNTTGGTTTCGNTNNN

PB0034.1_Irf4_1/Jaspar

Match Rank:2
Score:0.87
Offset:-4
Orientation:reverse strand
Alignment:----GTTTCG-----
TNTGGTTTCGATACN

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---GTTTCG------
NTGGTTTCGGTTNNN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCG--
TGGTTTCAGT

STE12/MA0393.1/Jaspar

Match Rank:5
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCG
TGTTTCA

PB0037.1_Isgf3g_1/Jaspar

Match Rank:6
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GTTTCG------
TNAGTTTCGATTTTN

STE12(MacIsaac)/Yeast

Match Rank:7
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCG
TGTTTCA

STE12/STE12_Alpha/92-STE12(Harbison)/Yeast

Match Rank:8
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCG
TGTTTCA

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCG------
CAGTTTCGNTTCTN

che-1/MA0260.1/Jaspar

Match Rank:10
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCG
GGTTTC-