Information for 5-TCYCCGGA (Motif 11)


Reverse Opposite:

p-value:1e-2
log p-value:-5.303e+00
Information Content per bp:1.733
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif4.86%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif1.91%
Average Position of motif in Targets10.8 +/- 2.9bp
Average Position of motif in Background12.8 +/- 3.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YER184C/MA0424.1/Jaspar

Match Rank:1
Score:0.82
Offset:1
Orientation:forward strand
Alignment:TCYCCGGA-
-CTCCGGAA

ECM22/MA0292.1/Jaspar

Match Rank:2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:TCYCCGGA
-CTCCGGA

SIP4/MA0380.1/Jaspar

Match Rank:3
Score:0.80
Offset:1
Orientation:forward strand
Alignment:TCYCCGGA
-CTCCGGA

CAT8/MA0280.1/Jaspar

Match Rank:4
Score:0.79
Offset:3
Orientation:forward strand
Alignment:TCYCCGGA-
---CCGGAA

GSM1/MA0308.1/Jaspar

Match Rank:5
Score:0.77
Offset:-8
Orientation:forward strand
Alignment:--------TCYCCGGA-----
ATTAAAAAACTCCGGAGTATA

NHP10/MA0344.1/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TCYCCGGA
TCCCCGGC

ASG1/MA0275.1/Jaspar

Match Rank:7
Score:0.75
Offset:3
Orientation:forward strand
Alignment:TCYCCGGA-
---CCGGAA

OAF1/MA0348.1/Jaspar

Match Rank:8
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TCYCCGGA
TATCTCCGA-

PDR3/MA0353.1/Jaspar

Match Rank:9
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TCYCCGGA
TCCGCGGA

PDR3/Literature(Harbison)/Yeast

Match Rank:10
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TCYCCGGA
TCCGCGGA