Homer de novo Motif Results (/srv/scratch/imk1/TFBindingPredictionProject/MouseMutantData/indivRep_allPeaks-pr1.IDR0.05.ZF5vsWT.HomerResults//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 53592
Total background sequences = 73530
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-8537	-1.966e+04	67.60%	14.33%	77.8bp (166.9bp)	BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.941) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-524	-1.208e+03	9.52%	3.01%	103.3bp (186.6bp)	AARE(HLH)/mES-cMyc-ChIP-Seq/Homer(0.680) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-221	-5.098e+02	5.31%	2.01%	77.2bp (191.1bp)	PB0091.1_Zbtb3_1/Jaspar(0.733) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-117	-2.706e+02	3.96%	1.81%	84.0bp (188.0bp)	YLR278C/MA0430.1/Jaspar(0.636) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-105	-2.421e+02	5.60%	3.11%	95.8bp (201.0bp)	EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer(0.645) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-86	-1.991e+02	29.64%	24.66%	116.1bp (193.7bp)	SKN7/MA0381.1/Jaspar(0.750) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-79	-1.824e+02	2.96%	1.42%	101.8bp (193.4bp)	SOK2(MacIsaac)/Yeast(0.783) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-67	-1.547e+02	3.13%	1.65%	102.1bp (197.2bp)	PB0099.1_Zfp691_1/Jaspar(0.742) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-53	-1.235e+02	2.91%	1.62%	99.6bp (200.7bp)	PB0026.1_Gm397_1/Jaspar(0.657) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-52	-1.216e+02	1.87%	0.87%	107.1bp (196.2bp)	ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast(0.596) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-49	-1.134e+02	2.96%	1.70%	112.4bp (213.0bp)	SeqBias: CA-repeat(0.686) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-47	-1.097e+02	35.64%	31.73%	121.2bp (195.0bp)	AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast(0.871) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-43	-9.936e+01	3.49%	2.20%	96.3bp (188.9bp)	PB0208.1_Zscan4_2/Jaspar(0.654) More Information \| Similar Motifs Found	motif file (matrix)
14		1e-41	-9.644e+01	7.41%	5.51%	114.0bp (203.0bp)	pros/dmmpmm(Bergman)/fly(0.661) More Information \| Similar Motifs Found	motif file (matrix)
15		1e-27	-6.261e+01	5.95%	4.57%	112.1bp (197.5bp)	STAT3/MA0144.2/Jaspar(0.742) More Information \| Similar Motifs Found	motif file (matrix)
16 *		1e-5	-1.331e+01	0.47%	0.31%	136.5bp (216.3bp)	Tag/dmmpmm(Papatsenko)/fly(0.644) More Information \| Similar Motifs Found	motif file (matrix)
17 *		1e-5	-1.168e+01	0.39%	0.25%	126.7bp (168.7bp)	UME1/UME1_YPD/[](Harbison)/Yeast(0.709) More Information \| Similar Motifs Found	motif file (matrix)
18 *		1e-2	-5.859e+00	0.67%	0.55%	130.9bp (216.8bp)	EWSR1-FLI1/MA0149.1/Jaspar(0.722) More Information \| Similar Motifs Found	motif file (matrix)
19 *		1e0	-1.449e+00	2.27%	2.20%	125.4bp (201.1bp)	br-Z2/dmmpmm(Pollard)/fly(0.688) More Information \| Similar Motifs Found	motif file (matrix)
20 *		1e0	-5.499e-01	1.04%	1.05%	149.0bp (182.4bp)	GAGA-repeat/SacCer-Promoters/Homer(0.735) More Information \| Similar Motifs Found	motif file (matrix)