Information for 20-GTGCTGGGAACC (Motif 15)


Reverse Opposite:

p-value:1e-27
log p-value:-6.261e+01
Information Content per bp:1.550
Number of Target Sequences with motif3186.0
Percentage of Target Sequences with motif5.95%
Number of Background Sequences with motif3360.2
Percentage of Background Sequences with motif4.57%
Average Position of motif in Targets183.5 +/- 112.1bp
Average Position of motif in Background224.9 +/- 197.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GTGCTGGGAACC
CTTCTGGGAAA-

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTGCTGGGAACC
-TTCTTGGAAAN

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTGCTGGGAACC
WDNCTGGGCA--

ACE2/MA0267.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTGCTGGGAACC
-TGCTGGT----

SWI5/MA0402.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTGCTGGGAACC
-TGCTGGTT---

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTGCTGGGAACC
--CSTGGGAAAD

SWI5/Literature(Harbison)/Yeast

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTGCTGGGAACC
-GGCTGA-----

SWI5(MacIsaac)/Yeast

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTGCTGGGAACC
-TGCTGGTT---

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTGCTGGGAACC
TTTCCAGGAAA-

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTGCTGGGAACC--
TTTCCAGGAAATGG