Information for 15-GTCTGTGTACCA (Motif 9)


Reverse Opposite:

p-value:1e-53
log p-value:-1.235e+02
Information Content per bp:1.657
Number of Target Sequences with motif1558.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif1189.5
Percentage of Background Sequences with motif1.62%
Average Position of motif in Targets170.6 +/- 99.6bp
Average Position of motif in Background217.5 +/- 200.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTCTGTGTACCA---
NNGTATGTGCACATNNN

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTCTGTGTACCA---
NTNTATGTGCACATNNN

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTCTGTGTACCA
NYYTGTTTACHN

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCTGTGTACCA
VBSYGTCTGG------

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTCTGTGTACCA
--CTGTTTAC--

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTCTGTGTACCA-
NNNNTTTGTTTACNNT

PHYPADRAFT_182268/MA1008.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTGTACCA
TTGTCGGTGA----

FOXO6/MA0849.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTCTGTGTACCA
---TGTTTAC--

FKH2/MA0297.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTCTGTGTACCA
---TGTTTAC--

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GTCTGTGTACCA
NNGCGTGTGTGCNGCN