Information for 19-AGAGATGGCTCA (Motif 14)


Reverse Opposite:

p-value:1e-41
log p-value:-9.644e+01
Information Content per bp:1.699
Number of Target Sequences with motif3970.0
Percentage of Target Sequences with motif7.41%
Number of Background Sequences with motif4054.8
Percentage of Background Sequences with motif5.51%
Average Position of motif in Targets176.3 +/- 114.0bp
Average Position of motif in Background211.8 +/- 203.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

pros/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGAGATGGCTCA
AGNCATG-----

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGAGATGGCTCA
AACAGATGGC---

JUN(var.2)/MA0489.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGAGATGGCTCA-
AGGAGATGACTCAT

Unknown2/Drosophila-Promoters/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGAGATGGCTCA
TAGKGATG-----

BATF::JUN/MA0462.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGAGATGGCTCA
-GAAATGACTCA

FOSL2/MA0478.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAGATGGCTCA-
--GGATGACTCAT

GCN4(MacIsaac)/Yeast

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGAGATGGCTCA
----ATGACTCA

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGAGATGGCTCA-
--GGATGACTCAT

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGAGATGGCTCA----
AGAGCGGGGTCAAGTA

JDP2/MA0655.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGAGATGGCTCA-
----ATGACTCAT