Information for 13-TAAGAGCACTGG (Motif 8)


Reverse Opposite:

p-value:1e-67
log p-value:-1.547e+02
Information Content per bp:1.754
Number of Target Sequences with motif1678.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif1211.6
Percentage of Background Sequences with motif1.65%
Average Position of motif in Targets173.9 +/- 102.1bp
Average Position of motif in Background212.2 +/- 197.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TAAGAGCACTGG---
NNNNTGAGCACTGTNNG

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TAAGAGCACTGG--
----ACCACTTGAA

tin/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TAAGAGCACTGG-
------CACTTGA

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TAAGAGCACTGG--
-----CCACTTGAA

tin/MA0247.2/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TAAGAGCACTGG---
-----CCACTTGANA

vnd/dmmpmm(Papatsenko)/fly

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TAAGAGCACTGG--
------CACTTGAN

tin/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TAAGAGCACTGG--
------CACTTGAG

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TAAGAGCACTGG-
---AAGCACTTAA

vnd/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TAAGAGCACTGG---
-----GCACTTGAGC

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TAAGAGCACTGG---
CATAAGACCACCATTAC