Information for 23-GGAAAGGAAAGG (Motif 17)


Reverse Opposite:

p-value:1e-5
log p-value:-1.168e+01
Information Content per bp:1.949
Number of Target Sequences with motif209.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif185.9
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets193.2 +/- 126.7bp
Average Position of motif in Background231.7 +/- 168.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

UME1/UME1_YPD/[](Harbison)/Yeast

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GGAAAGGAAAGG--
---AAGGAAANGTA

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGAAAGGAAAGG
CGGAAGTGAAAC-

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGAAAGGAAAGG
GGAAGTGAAAST

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGAAAGGAAAGG
AGAAACGAAAGT

AZF1/MA0277.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGAAAGGAAAGG
-AAAAAGAAA--

RME1(MacIsaac)/Yeast

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGAAAGGAAAGG
TCCAAAGGAA---

RME1/MA0370.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGAAAGGAAAGG
TCCAAAGGAA---

Dip3/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGAAAGGAAAGG
GGNANGGNGTGG

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGAAAGGAAAGG
TGGAACAGMA---

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGAAAGGAAAGG
GAAASYGAAASY