Information for 17-TTATGTGTATGG (Motif 11)


Reverse Opposite:

p-value:1e-49
log p-value:-1.134e+02
Information Content per bp:1.697
Number of Target Sequences with motif1584.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif1251.0
Percentage of Background Sequences with motif1.70%
Average Position of motif in Targets171.2 +/- 112.4bp
Average Position of motif in Background215.6 +/- 213.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: CA-repeat

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTATGTGTATGG
-TGTGTGTGTG-

NAC055/MA0937.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTATGTGTATGG
TTACGTGT----

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTATGTGTATGG
NNNNTTGTGTGCTTNN

SFP1(MacIsaac)/Yeast

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TTATGTGTATGG--
----ATGTACGGGT

LEC2/MA0581.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTATGTGTATGG-
--ATGTGCATGNN

bap/MA0211.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTATGTGTATGG
TTAAGTG-----

cad/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTATGTGTATGG
TTTATG-------

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTATGTGTATGG----
NTTNTATGAATGTGNNC

RAP1(MacIsaac)/Yeast

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TTATGTGTATGG----
----GTGTATGGGTGT

cad/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTATGTGTATGG
NTTANGC------