Information for 9-GGGTGCTR (Motif 12)


Reverse Opposite:

p-value:1e-47
log p-value:-1.097e+02
Information Content per bp:1.838
Number of Target Sequences with motif19098.0
Percentage of Target Sequences with motif35.64%
Number of Background Sequences with motif23331.7
Percentage of Background Sequences with motif31.73%
Average Position of motif in Targets195.0 +/- 121.2bp
Average Position of motif in Background227.6 +/- 195.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GGGTGCTR
GGGTGC--

AFT2(MacIsaac)/Yeast

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GGGTGCTR
GGGTGCA-

RCS1(MacIsaac)/Yeast

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GGGTGCTR
GGGTGCA-

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GGGTGCTR-
GGGTGCANT

AFT2/MA0270.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGGTGCTR
GGGGTGTG-

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGTGCTR
CGGAGC--

AFT1/MA0269.1/Jaspar

Match Rank:7
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------GGGTGCTR-------
CNANNCGGGTGCAATATNNNA

ABI4(2)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGGTGCTR--
CGGTGCTTCC

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGGTGCTR
---NGCTN

brk/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGTGCTR
TGGCGCT-