Homer de novo Motif Results (/srv/scratch/training_camp/tc2016/user23/analysis/motifs/Kt_3_S15_R1.trimmed.nodup_peaks.narrowPeak/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 4334
Total background sequences = 20014
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-218	-5.034e+02	25.96%	9.35%	327.4bp (220.6bp)	REB1(MacIsaac)/Yeast(0.994) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-94	-2.186e+02	39.76%	25.38%	351.9bp (214.6bp)	PB0192.1_Tcfap2e_2/Jaspar(0.921) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-91	-2.101e+02	25.27%	13.65%	353.4bp (260.7bp)	RSC3/MA0374.1/Jaspar(0.962) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-61	-1.414e+02	39.60%	27.89%	381.7bp (251.2bp)	btd/dmmpmm(Noyes)/fly(0.697) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-59	-1.376e+02	9.44%	3.82%	367.1bp (224.3bp)	IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer(0.964) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-43	-9.989e+01	22.57%	14.63%	394.8bp (249.9bp)	MET31(MacIsaac)/Yeast(0.845) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-37	-8.713e+01	42.76%	33.31%	416.5bp (214.5bp)	TATA-box/SacCer-Promoters/Homer(0.894) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-30	-6.965e+01	18.58%	12.44%	409.3bp (222.0bp)	FHL1(MacIsaac)/Yeast(0.779) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-26	-6.187e+01	18.21%	12.46%	452.3bp (222.2bp)	STB4/STB4_YPD/[](Harbison)/Yeast(0.697) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-25	-5.781e+01	9.44%	5.48%	453.6bp (209.6bp)	TOD6?/SacCer-Promoters/Homer(0.948) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-24	-5.566e+01	5.35%	2.55%	332.4bp (234.0bp)	OPI1(MacIsaac)/Yeast(0.822) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-23	-5.436e+01	7.78%	4.32%	439.2bp (218.5bp)	Unknown2/Drosophila-Promoters/Homer(0.645) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-23	-5.391e+01	5.33%	2.57%	426.7bp (206.2bp)	SKN7(MacIsaac)/Yeast(0.769) More Information \| Similar Motifs Found	motif file (matrix)
14		1e-21	-4.945e+01	8.10%	4.70%	390.9bp (217.8bp)	che-1/MA0260.1/Jaspar(0.725) More Information \| Similar Motifs Found	motif file (matrix)
15		1e-21	-4.909e+01	12.32%	8.07%	426.3bp (208.6bp)	SeqBias: GA-repeat(0.877) More Information \| Similar Motifs Found	motif file (matrix)
16		1e-20	-4.778e+01	11.72%	7.63%	466.0bp (222.4bp)	SKN7/MA0381.1/Jaspar(0.688) More Information \| Similar Motifs Found	motif file (matrix)