Information for 11-CCGTGCAK (Motif 8)


Reverse Opposite:

p-value:1e-30
log p-value:-6.965e+01
Information Content per bp:1.725
Number of Target Sequences with motif805.0
Percentage of Target Sequences with motif18.58%
Number of Background Sequences with motif2489.6
Percentage of Background Sequences with motif12.44%
Average Position of motif in Targets508.6 +/- 409.3bp
Average Position of motif in Background295.8 +/- 222.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FHL1(MacIsaac)/Yeast

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CCGTGCAK
ATCCGTACAT

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCGTGCAK
ACCCGTACAT

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCGTGCAK
CACCCGTACAT

SFP1(MacIsaac)/Yeast

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CCGTGCAK
ACCCGTACAT

PHD1/MA0355.1/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CCGTGCAK--
ACCTGCAGCA

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:6
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------CCGTGCAK-----
TCGCGTCCGTACAGGAGGG

SPL14/MA0586.1/Jaspar

Match Rank:7
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------CCGTGCAK-----
TCGCGTCCGTACAGGAGGG

SOK2/MA0385.1/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCGTGCAK--
NNCCTGCAGGT

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:9
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CCGTGCAK
CACCCGTACA-

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCGTGCAK-
TCCATGCAAA