Information for 5-CSCSCCSB (Motif 4)


Reverse Opposite:

p-value:1e-61
log p-value:-1.414e+02
Information Content per bp:1.512
Number of Target Sequences with motif1716.0
Percentage of Target Sequences with motif39.60%
Number of Background Sequences with motif5580.7
Percentage of Background Sequences with motif27.89%
Average Position of motif in Targets510.8 +/- 381.7bp
Average Position of motif in Background291.8 +/- 251.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

btd/dmmpmm(Noyes)/fly

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CSCSCCSB
ATCCGCCCCC-

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CSCSCCSB----
GGTCCCGCCCCCTTCTC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CSCSCCSB
CCCCCCCC

btd/MA0443.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CSCSCCSB
TCCGCCCCCT

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CSCSCCSB----
TCCGCCCCCGCATT

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CSCSCCSB----
AAATTCCCCCCGGAAGT

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CSCSCCSB-----
GCCCCGCCCCCTCCC

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CSCSCCSB-
GCCCCGCCCCC

RSC3/MA0374.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CSCSCCSB
CGCGCGG-

SUT1?/SacCer-Promoters/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CSCSCCSB
CCCCGCGC