Information for 3-CGCGCGGY (Motif 3)


Reverse Opposite:

p-value:1e-91
log p-value:-2.101e+02
Information Content per bp:1.634
Number of Target Sequences with motif1095.0
Percentage of Target Sequences with motif25.27%
Number of Background Sequences with motif2731.1
Percentage of Background Sequences with motif13.65%
Average Position of motif in Targets468.8 +/- 353.4bp
Average Position of motif in Background296.7 +/- 260.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC3/MA0374.1/Jaspar

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:CGCGCGGY
CGCGCGG-

RSC30/MA0375.1/Jaspar

Match Rank:2
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGY
CGCGCGCG--

MBP1/MA0329.1/Jaspar

Match Rank:3
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGGY
NNCGCGT---

Tcfl5/MA0632.1/Jaspar

Match Rank:4
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGY
GGCACGTGCC

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:5
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGGY
TAGCGCGC---

SUT1(MacIsaac)/Yeast

Match Rank:6
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CGCGCGGY
CGCGGGG-

SUT1/MA0399.1/Jaspar

Match Rank:7
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CGCGCGGY
CGCGGGG-

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGGY
NNCGCGTGNN

SWI6(MacIsaac)/Yeast

Match Rank:9
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGY
GACGCG----

CMTA2/MA0969.1/Jaspar

Match Rank:10
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CGCGCGGY
ACGCGGNNN