Homer Known Motif Enrichment Results (/srv/scratch/training_camp/tc2016/user23/analysis/motifs/Kt_3_S15_R1.trimmed.nodup_peaks.narrowPeak)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 4332, Total Background Sequences = 20007
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1ABF1/SacCer-Promoters/Homer1e-217-5.015e+020.00001548.035.73%3203.216.01%motif file (matrix) pdf
2REB1/SacCer-Promoters/Homer1e-186-4.295e+020.0000985.022.73%1645.88.23%motif file (matrix) pdf
3RLR1?/SacCer-Promoters/Homer1e-66-1.532e+020.00002022.046.67%6789.033.93%motif file (matrix) pdf
4c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer1e-56-1.290e+020.0000609.014.05%1424.07.12%motif file (matrix) pdf
5SeqBias: CG-repeat1e-50-1.167e+020.0000798.018.42%2144.610.72%motif file (matrix) pdf
6n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer1e-48-1.108e+020.0000707.016.32%1851.09.25%motif file (matrix) pdf
7bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer1e-46-1.069e+020.0000462.010.66%1034.35.17%motif file (matrix) pdf
8Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer1e-42-9.814e+010.0000431.09.95%970.44.85%motif file (matrix) pdf
9DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer1e-42-9.731e+010.00001105.025.50%3443.917.21%motif file (matrix) pdf
10CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer1e-39-9.210e+010.0000597.013.78%1563.67.81%motif file (matrix) pdf
11USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-39-9.195e+010.0000512.011.82%1268.86.34%motif file (matrix) pdf
12SFP1/SacCer-Promoters/Homer1e-38-8.778e+010.0000642.014.82%1749.78.74%motif file (matrix) pdf
13Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer1e-35-8.096e+010.0000414.09.55%990.54.95%motif file (matrix) pdf
14Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer1e-29-6.815e+010.0000455.010.50%1197.55.98%motif file (matrix) pdf
15Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer1e-29-6.781e+010.0000617.014.24%1787.58.93%motif file (matrix) pdf
16E-box/Arabidopsis-Promoters/Homer1e-27-6.377e+010.0000534.012.32%1508.27.54%motif file (matrix) pdf
17PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer1e-26-6.002e+010.0000909.020.98%2985.314.92%motif file (matrix) pdf
18Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer1e-23-5.307e+010.0000140.03.23%244.31.22%motif file (matrix) pdf
19PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer1e-22-5.221e+010.0000991.022.87%3398.216.98%motif file (matrix) pdf
20E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-22-5.215e+010.0000823.018.99%2717.413.58%motif file (matrix) pdf
21E-box(bHLH)/Promoter/Homer1e-21-4.989e+010.0000135.03.12%239.51.20%motif file (matrix) pdf
22IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer1e-21-4.976e+010.00001364.031.48%4994.724.96%motif file (matrix) pdf
23KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer1e-21-4.924e+010.0000609.014.05%1901.29.50%motif file (matrix) pdf
24TATA-box/SacCer-Promoters/Homer1e-21-4.911e+010.00001906.043.99%7378.136.87%motif file (matrix) pdf
25FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer1e-19-4.516e+010.0000430.09.92%1255.26.27%motif file (matrix) pdf
26NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer1e-18-4.265e+010.0000833.019.22%2858.614.29%motif file (matrix) pdf
27TOD6?/SacCer-Promoters/Homer1e-17-4.062e+010.0000335.07.73%939.54.70%motif file (matrix) pdf
28SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer1e-16-3.911e+010.00001104.025.48%4030.120.14%motif file (matrix) pdf
29Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-15-3.542e+010.0000334.07.71%972.74.86%motif file (matrix) pdf
30Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-14-3.395e+010.0000297.06.85%847.24.23%motif file (matrix) pdf
31c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer1e-14-3.235e+010.0000360.08.31%1093.35.46%motif file (matrix) pdf
32KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-13-3.201e+010.0000495.011.42%1617.98.09%motif file (matrix) pdf
33ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer1e-13-3.104e+010.0000322.07.43%961.84.81%motif file (matrix) pdf
34MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer1e-12-2.979e+010.0000812.018.74%2932.814.66%motif file (matrix) pdf
35BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer1e-12-2.857e+010.00001442.033.28%5660.528.29%motif file (matrix) pdf
36Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer1e-12-2.822e+010.00001080.024.92%4091.220.45%motif file (matrix) pdf
37KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer1e-12-2.779e+010.0000261.06.02%760.63.80%motif file (matrix) pdf
38GAGA-repeat/Arabidopsis-Promoters/Homer1e-11-2.704e+010.0000548.012.65%1883.19.41%motif file (matrix) pdf
39Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer1e-9-2.295e+010.0000163.03.76%440.72.20%motif file (matrix) pdf
40Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer1e-8-1.965e+010.0000160.03.69%451.12.25%motif file (matrix) pdf
41HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer1e-8-1.910e+010.0000759.017.52%2875.914.37%motif file (matrix) pdf
42Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer1e-8-1.870e+010.0000131.03.02%354.21.77%motif file (matrix) pdf
43SUT1?/SacCer-Promoters/Homer1e-7-1.762e+010.00002983.068.84%12986.264.90%motif file (matrix) pdf
44NRF(NRF)/Promoter/Homer1e-7-1.708e+010.0000111.02.56%294.21.47%motif file (matrix) pdf
45Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer1e-6-1.524e+010.0000144.03.32%425.82.13%motif file (matrix) pdf
46HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer1e-6-1.485e+010.00001649.038.06%6891.834.44%motif file (matrix) pdf
47HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer1e-6-1.391e+010.0000490.011.31%1829.79.14%motif file (matrix) pdf
48Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-5-1.301e+010.00001034.023.86%4196.720.97%motif file (matrix) pdf
49ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer1e-5-1.253e+010.000055.01.27%129.50.65%motif file (matrix) pdf
50EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-5-1.206e+010.0000105.02.42%306.11.53%motif file (matrix) pdf
51SeqBias: TA-repeat1e-5-1.202e+010.00003817.088.09%17170.685.81%motif file (matrix) pdf
52GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer1e-5-1.158e+010.0001130.03.00%403.62.02%motif file (matrix) pdf
53E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer1e-4-1.132e+010.0001188.04.34%630.93.15%motif file (matrix) pdf
54E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer1e-4-1.114e+010.0001125.02.88%388.21.94%motif file (matrix) pdf
55BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-4-1.098e+010.0001589.013.59%2306.511.53%motif file (matrix) pdf
56Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-4-1.076e+010.0001844.019.48%3419.817.09%motif file (matrix) pdf
57Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer1e-4-1.040e+010.000286.01.98%249.81.25%motif file (matrix) pdf
58PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer1e-4-1.004e+010.0003523.012.07%2043.010.21%motif file (matrix) pdf
59PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-4-9.721e+000.0004218.05.03%770.63.85%motif file (matrix) pdf
60RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer1e-4-9.349e+000.0006535.012.35%2110.110.55%motif file (matrix) pdf
61NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer1e-3-8.645e+000.001145.01.04%115.50.58%motif file (matrix) pdf
62CRE(bZIP)/Promoter/Homer1e-3-8.386e+000.0014192.04.43%683.73.42%motif file (matrix) pdf
63ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer1e-3-7.990e+000.002119.00.44%35.30.18%motif file (matrix) pdf
64E2F(E2F)/Hela-CellCycle-Expression/Homer1e-3-7.443e+000.0035119.02.75%402.12.01%motif file (matrix) pdf
65SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer1e-3-7.437e+000.0035298.06.88%1139.65.70%motif file (matrix) pdf
66Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-3-7.192e+000.0044186.04.29%676.03.38%motif file (matrix) pdf
67PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-3-7.177e+000.00441413.032.61%6077.830.37%motif file (matrix) pdf
68Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-3-6.943e+000.0055195.04.50%717.03.58%motif file (matrix) pdf
69RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-2-6.804e+000.006277.01.78%245.71.23%motif file (matrix) pdf
70PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-2-6.783e+000.006385.01.96%276.11.38%motif file (matrix) pdf
71ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-2-6.713e+000.0066566.013.06%2312.811.56%motif file (matrix) pdf
72TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer1e-2-6.570e+000.007552.01.20%153.70.77%motif file (matrix) pdf
73Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer1e-2-6.379e+000.0090216.04.98%814.84.07%motif file (matrix) pdf
74ETS(ETS)/Promoter/Homer1e-2-5.800e+000.0158337.07.78%1341.26.70%motif file (matrix) pdf
75Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer1e-2-5.626e+000.0186169.03.90%632.03.16%motif file (matrix) pdf
76AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-2-5.601e+000.0188610.014.08%2540.412.70%motif file (matrix) pdf
77TATA-box/Drosophila-Promoters/Homer1e-2-5.526e+000.0200197.04.55%750.63.75%motif file (matrix) pdf
78AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer1e-2-5.510e+000.0201169.03.90%633.73.17%motif file (matrix) pdf
79E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-2-5.497e+000.0201272.06.28%1069.65.35%motif file (matrix) pdf
80GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer1e-2-5.394e+000.022042.00.97%125.70.63%motif file (matrix) pdf
81ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer1e-2-5.140e+000.0280166.03.83%627.43.14%motif file (matrix) pdf
82GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-2-5.087e+000.0291786.018.14%3341.416.70%motif file (matrix) pdf
83Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-2-5.018e+000.0309500.011.54%2074.710.37%motif file (matrix) pdf
84Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer1e-2-4.999e+000.03111678.038.73%7383.836.90%motif file (matrix) pdf
85Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-2-4.921e+000.03321319.030.44%5751.928.75%motif file (matrix) pdf