Information for 15-GGGGTTCG (Motif 11)


Reverse Opposite:

p-value:1e-24
log p-value:-5.566e+01
Information Content per bp:1.904
Number of Target Sequences with motif232.0
Percentage of Target Sequences with motif5.35%
Number of Background Sequences with motif509.8
Percentage of Background Sequences with motif2.55%
Average Position of motif in Targets384.2 +/- 332.4bp
Average Position of motif in Background286.9 +/- 234.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

OPI1(MacIsaac)/Yeast

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GGGGTTCG
-CGGTTCG

OPI1/MA0349.1/Jaspar

Match Rank:2
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GGGGTTCG
-CGGTTCG

OPI1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GGGGTTCG-
--GATTCGA

ZBTB7B/MA0694.1/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GGGGTTCG-
TTCGGTGGTCGC

PB0025.1_Glis2_1/Jaspar

Match Rank:5
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGTTCG---
NTNTGGGGGGTCNNNA

lin-14/MA0261.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGGGTTCG
-GTGTTC-

MA0261.1_lin-14/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGGGTTCG
-GTGTTC-

ADR1/MA0268.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGGGTTCG
GTGGGGT---

MSN2/MA0341.1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGGTTCG
AGGGG----

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GGGGTTCG-
NTCGGTGGTCGC