Information for 9-MGTATATA (Motif 7)


Reverse Opposite:

p-value:1e-37
log p-value:-8.713e+01
Information Content per bp:1.889
Number of Target Sequences with motif1853.0
Percentage of Target Sequences with motif42.76%
Number of Background Sequences with motif6665.9
Percentage of Background Sequences with motif33.31%
Average Position of motif in Targets428.6 +/- 416.5bp
Average Position of motif in Background298.5 +/- 214.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.53
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-box/SacCer-Promoters/Homer

Match Rank:1
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:MGTATATA----
--TATATAWDVV

MOT2/MA0379.1/Jaspar

Match Rank:2
Score:0.87
Offset:3
Orientation:forward strand
Alignment:MGTATATA
---ATATA

Cf2/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.83
Offset:1
Orientation:forward strand
Alignment:MGTATATA--
-GTATATATA

Cf2/MA0015.1/Jaspar

Match Rank:4
Score:0.82
Offset:1
Orientation:forward strand
Alignment:MGTATATA---
-GTATATATAC

PB0163.1_Six6_2/Jaspar

Match Rank:5
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---MGTATATA------
ANNNGGATATATCCNNN

NHP6A/MA0345.1/Jaspar

Match Rank:6
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----MGTATATA--------
NNATNNTTATATATAGNNNAN

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.78
Offset:1
Orientation:forward strand
Alignment:MGTATATA--------
-GTATAAAAGGCGGGG

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.78
Offset:1
Orientation:forward strand
Alignment:MGTATATA--------
-GTATAAAAGGCGGGG

SPT15/MA0386.1/Jaspar

Match Rank:9
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----MGTATATA---------
NNNNAATATATATANCTANNN

TBP(- other)/several species/AthaMap

Match Rank:10
Score:0.76
Offset:0
Orientation:forward strand
Alignment:MGTATATA----
ACTATAAATACC