Information for 22-GGCCCTCC (Motif 16)


Reverse Opposite:

p-value:1e-20
log p-value:-4.778e+01
Information Content per bp:1.798
Number of Target Sequences with motif508.0
Percentage of Target Sequences with motif11.72%
Number of Background Sequences with motif1527.1
Percentage of Background Sequences with motif7.63%
Average Position of motif in Targets515.1 +/- 466.0bp
Average Position of motif in Background291.8 +/- 222.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SKN7/MA0381.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGCCCTCC
GGCCAT--

TCP23/MA1066.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGCCCTCC
GGGCCCAC-

TCP15/MA1062.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGCCCTCC
GGGCCCAC-

OsI_08196/MA1050.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGCCCTCC
GGGCCCAC-

OJ1581_H09.2/MA1031.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGCCCTCC
GTGGGCCCAC-

NRG1/NRG1_H2O2Hi/[](Harbison)/Yeast

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGCCCTCC
GGACCCT--

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGCCCTCC----
KGCCCTTCCCCA

TCP20/MA1065.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCCCTCC-
GGGCCCACCA

ADR1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGCCCTCC-
---ACCCCN

ADR1(MacIsaac)/Yeast

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGCCCTCC-
---ACCCCN