Information for 20-CCCGTTTC (Motif 14)


Reverse Opposite:

p-value:1e-21
log p-value:-4.945e+01
Information Content per bp:1.754
Number of Target Sequences with motif351.0
Percentage of Target Sequences with motif8.10%
Number of Background Sequences with motif940.9
Percentage of Background Sequences with motif4.70%
Average Position of motif in Targets453.5 +/- 390.9bp
Average Position of motif in Background291.7 +/- 217.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

che-1/MA0260.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CCCGTTTC
--GGTTTC

MA0260.1_che-1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CCCGTTTC
--GGTTTC

STE12/MA0393.1/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CCCGTTTC-
--TGTTTCA

Unknown3/Arabidopsis-Promoters/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCCGTTTC---
-CCGGTTTART

STE12(MacIsaac)/Yeast

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCCGTTTC-
--TGTTTCA

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCCGTTTC---
NNGCACCTTTCTCC

OPI1(MacIsaac)/Yeast

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCCGTTTC-
--CGGTTCG

Kr/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCCGTTTC
AACCCTTTT-

Kr/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCCGTTTC
TAACCCTTTT-

OPI1/MA0349.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCCGTTTC-
--CGGTTCG