Homer de novo Motif Results (/srv/scratch/training_camp/tc2016/user23/analysis/motifs/Kz_300_S4_R1.trimmed.nodup_peaks.narrowPeak/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 4349
Total background sequences = 21699
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-226	-5.223e+02	27.94%	10.40%	288.6bp (207.4bp)	REB1(MacIsaac)/Yeast(0.994) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-79	-1.820e+02	31.69%	19.59%	338.2bp (228.7bp)	RSC3/MA0374.1/Jaspar(0.889) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-65	-1.505e+02	49.71%	36.95%	354.4bp (193.1bp)	PB0192.1_Tcfap2e_2/Jaspar(0.892) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-53	-1.224e+02	8.60%	3.52%	267.7bp (224.4bp)	IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer(0.974) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-45	-1.057e+02	39.80%	29.62%	337.0bp (197.8bp)	TATA-box/SacCer-Promoters/Homer(0.899) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-35	-8.117e+01	14.39%	8.62%	325.6bp (207.1bp)	STB4/STB4_YPD/[](Harbison)/Yeast(0.838) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-34	-7.836e+01	21.41%	14.49%	328.4bp (199.1bp)	SPL14(SBP)/Arabidopsis thaliana/AthaMap(0.856) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-30	-6.959e+01	21.73%	15.14%	316.3bp (189.7bp)	MET31(MacIsaac)/Yeast(0.722) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-24	-5.549e+01	15.98%	10.86%	337.0bp (212.6bp)	RDS1(MacIsaac)/Yeast(0.859) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-23	-5.374e+01	8.83%	5.13%	330.2bp (196.2bp)	TOD6?/SacCer-Promoters/Homer(0.938) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-19	-4.605e+01	15.59%	10.96%	379.3bp (220.0bp)	Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer(0.977) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-16	-3.835e+01	7.54%	4.63%	334.4bp (196.1bp)	EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer(0.780) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-12	-2.909e+01	10.23%	7.22%	337.3bp (194.2bp)	P0510F09.23/MA1030.1/Jaspar(0.794) More Information \| Similar Motifs Found	motif file (matrix)
14		1e-12	-2.780e+01	5.61%	3.47%	349.3bp (192.5bp)	SWI4(MacIsaac)/Yeast(0.857) More Information \| Similar Motifs Found	motif file (matrix)
15 *		1e-11	-2.629e+01	11.86%	8.78%	333.9bp (192.4bp)	ERF069/MA0997.1/Jaspar(0.657) More Information \| Similar Motifs Found	motif file (matrix)