Information for 5-GGCACGTG (Motif 4)


Reverse Opposite:

p-value:1e-53
log p-value:-1.224e+02
Information Content per bp:1.953
Number of Target Sequences with motif374.0
Percentage of Target Sequences with motif8.60%
Number of Background Sequences with motif764.3
Percentage of Background Sequences with motif3.52%
Average Position of motif in Targets369.8 +/- 267.7bp
Average Position of motif in Background274.4 +/- 224.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:GGCACGTG
GGCACGTG

HEY1/MA0823.1/Jaspar

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GGCACGTG--
GGCACGTGTC

HBI1/MA1025.1/Jaspar

Match Rank:3
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--GGCACGTG--
CGGGCACGTGCT

HEY2/MA0649.1/Jaspar

Match Rank:4
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GGCACGTG--
GACACGTGCC

BHLHE40/MA0464.2/Jaspar

Match Rank:5
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GGCACGTG--
GTCACGTGAN

MYC4/MA0569.1/Jaspar

Match Rank:6
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:GGCACGTG-
-GCACGTGN

PL0016.1_ref-1/Jaspar

Match Rank:7
Score:0.93
Offset:-4
Orientation:forward strand
Alignment:----GGCACGTG-----
TCAAGGCACGTGCCTTA

PHYPADRAFT_48267/MA1021.1/Jaspar

Match Rank:8
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:GGCACGTG-
-GCACGTGG

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-GGCACGTG-
NGKCACGTGM

BHLH104/MA0960.1/Jaspar

Match Rank:10
Score:0.92
Offset:0
Orientation:forward strand
Alignment:GGCACGTG--
GGCACGTGCC