Information for 8-TGYACGGW (Motif 7)


Reverse Opposite:

p-value:1e-34
log p-value:-7.836e+01
Information Content per bp:1.625
Number of Target Sequences with motif931.0
Percentage of Target Sequences with motif21.41%
Number of Background Sequences with motif3144.6
Percentage of Background Sequences with motif14.49%
Average Position of motif in Targets422.3 +/- 328.4bp
Average Position of motif in Background277.0 +/- 199.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.86
Offset:-6
Orientation:reverse strand
Alignment:------TGYACGGW-----
CCCTNCTGTACGGACGNNA

SPL14/MA0586.1/Jaspar

Match Rank:2
Score:0.86
Offset:-6
Orientation:reverse strand
Alignment:------TGYACGGW-----
CCCTNCTGTACGGACGNNA

SPL5/MA1059.1/Jaspar

Match Rank:3
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-TGYACGGW
TTGTACGGC

SPL12/MA1057.1/Jaspar

Match Rank:4
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TGYACGGW
TGTACGGT

SPL11/MA1056.1/Jaspar

Match Rank:5
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---TGYACGGW-
TATCGTACGGAT

FHL1(MacIsaac)/Yeast

Match Rank:6
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-TGYACGGW-
ATGTACGGAT

SPL4/MA1058.1/Jaspar

Match Rank:7
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TGYACGGW-
CGTACGGTT

POPTR_0002s00440g/MA0955.1/Jaspar

Match Rank:8
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TGYACGGW
GGTACGG-

AtSPL3(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:9
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----TGYACGGW---
NAANNNGTACGGNAAN

SPL3/MA0577.1/Jaspar

Match Rank:10
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----TGYACGGW---
NAANNNGTACGGNAAN