Information for 14-GAGATGAG (Motif 10)


Reverse Opposite:

p-value:1e-23
log p-value:-5.374e+01
Information Content per bp:1.931
Number of Target Sequences with motif384.0
Percentage of Target Sequences with motif8.83%
Number of Background Sequences with motif1114.4
Percentage of Background Sequences with motif5.13%
Average Position of motif in Targets357.9 +/- 330.2bp
Average Position of motif in Background272.0 +/- 196.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TOD6?/SacCer-Promoters/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:GAGATGAG--
GCGATGAGMT

TOD6/MA0350.1/Jaspar

Match Rank:2
Score:0.86
Offset:-5
Orientation:reverse strand
Alignment:-----GAGATGAG--------
NNANNGCGATGAGCTNNNNNN

DOT6/MA0351.1/Jaspar

Match Rank:3
Score:0.85
Offset:-5
Orientation:reverse strand
Alignment:-----GAGATGAG--------
ANGANGCGATGAGGTGCNNNN

CHA4(MacIsaac)/Yeast

Match Rank:4
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GAGATGAG
TGCGATGAG

GAT1/GAT1_RAPA/1-GZF3,2-GLN3(Harbison)/Yeast

Match Rank:5
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GAGATGAG
-AGATAAG

GAT1(MacIsaac)/Yeast

Match Rank:6
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GAGATGAG
-AGATAAG

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GAGATGAG-
NNGAGATAAGA

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GAGATGAG--
NAGATAAGNN

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GAGATGAG--
CAGATAAGGN

GZF3/Literature(Harbison)/Yeast

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GAGATGAG
--GATAAG