Information for 10-TGWGTRKG (Motif 8)


Reverse Opposite:

p-value:1e-30
log p-value:-6.959e+01
Information Content per bp:1.720
Number of Target Sequences with motif945.0
Percentage of Target Sequences with motif21.73%
Number of Background Sequences with motif3285.6
Percentage of Background Sequences with motif15.14%
Average Position of motif in Targets437.0 +/- 316.3bp
Average Position of motif in Background273.7 +/- 189.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MET31(MacIsaac)/Yeast

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TGWGTRKG
GGTGTGGC

SeqBias: CA-repeat

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGWGTRKG--
TGTGTGTGTG

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TGWGTRKG-----
TGCGGAGTGGGACTGG

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------TGWGTRKG---
NTTNTATGAATGTGNNC

z/dmmpmm(Down)/fly

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGWGTRKG
TGAGTG--

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGWGTRKG--
TGCGTGGGYG

z/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGWGTRKG
TGAGTG--

z/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGWGTRKG
TTGAGTG--

RAP1/MA0359.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGWGTRKG--
TGTATGGGTG

RAP1(MacIsaac)/Yeast

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGWGTRKG---
GTGTATGGGTGT