Information for 18-GCCCASGG (Motif 12)


Reverse Opposite:

p-value:1e-16
log p-value:-3.835e+01
Information Content per bp:1.772
Number of Target Sequences with motif328.0
Percentage of Target Sequences with motif7.54%
Number of Background Sequences with motif1004.4
Percentage of Background Sequences with motif4.63%
Average Position of motif in Targets458.5 +/- 334.4bp
Average Position of motif in Background282.0 +/- 196.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GCCCASGG--
GTCCCCAGGGGA

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCCCASGG----
NTCCCCTCAGGGANT

TFAP2C/MA0524.2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCCCASGG--
TGCCCCAGGGCA

TFAP2B/MA0811.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCCCASGG--
TGCCCCAGGGCA

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCCCASGG---
TTGCCCTAGGGCAT

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCCCASGG----
GGCACCCAGGGGTGC

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GCCCASGG---
NNTTTGCACACGGCCC

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCCCASGG----
NTCGCCTCAGGCAAT

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCCCASGG--
TGCCCNGGGGCA

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCCASGG----
NTNGCCTCAGGCNNN