Information for 7-CGGSTCGA (Motif 6)


Reverse Opposite:

p-value:1e-35
log p-value:-8.117e+01
Information Content per bp:1.733
Number of Target Sequences with motif626.0
Percentage of Target Sequences with motif14.39%
Number of Background Sequences with motif1871.4
Percentage of Background Sequences with motif8.62%
Average Position of motif in Targets387.9 +/- 325.6bp
Average Position of motif in Background274.8 +/- 207.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:1
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CGGSTCGA
TCGGNNCGA

STB4(MacIsaac)/Yeast

Match Rank:2
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CGGSTCGA
TCGGNNCGA

OPI1(MacIsaac)/Yeast

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CGGSTCGA
CGGTTCG-

OPI1/Literature(Harbison)/Yeast

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CGGSTCGA
-GATTCGA

OPI1/MA0349.1/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CGGSTCGA
CGGTTCG-

XBP1/MA0414.1/Jaspar

Match Rank:6
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CGGSTCGA--
---CTCGAGA

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CGGSTCGA---
CGCGCCGGGTCACGTA

XBP1(MacIsaac)/Yeast

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGGSTCGA---
---CTCGAGGA

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CGGSTCGA---
AGAGCGGGGTCAAGTA

POL001.1_MTE/Jaspar

Match Rank:10
Score:0.59
Offset:-9
Orientation:reverse strand
Alignment:---------CGGSTCGA--
NCGACCGCTCCGCTCGAAA