Information for 2-CGCGBSGS (Motif 2)


Reverse Opposite:

p-value:1e-79
log p-value:-1.820e+02
Information Content per bp:1.452
Number of Target Sequences with motif1378.0
Percentage of Target Sequences with motif31.69%
Number of Background Sequences with motif4251.2
Percentage of Background Sequences with motif19.59%
Average Position of motif in Targets420.7 +/- 338.2bp
Average Position of motif in Background272.0 +/- 228.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.52
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC3/MA0374.1/Jaspar

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:CGCGBSGS
CGCGCGG-

SUT1/MA0399.1/Jaspar

Match Rank:2
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CGCGBSGS
CGCGGGG-

SUT1(MacIsaac)/Yeast

Match Rank:3
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CGCGBSGS
CGCGGGG-

RSC30/MA0375.1/Jaspar

Match Rank:4
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CGCGBSGS
CGCGCGCG--

MBP1/MA0329.1/Jaspar

Match Rank:5
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CGCGBSGS
NNCGCGT---

Tcfl5/MA0632.1/Jaspar

Match Rank:6
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CGCGBSGS
GGCACGTGCC

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:7
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CGCGBSGS
TAGCGCGC---

CMTA3/MA0970.1/Jaspar

Match Rank:8
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----CGCGBSGS
NNNACGCGG---

CMTA2/MA0969.1/Jaspar

Match Rank:9
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CGCGBSGS
ACGCGGNNN

SWI6(MacIsaac)/Yeast

Match Rank:10
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CGCGBSGS
CGCGTC--