Homer de novo Motif Results (/srv/scratch/training_camp/tc2016/user23/analysis/motifs/Cz_800_S7_R1.trimmed.nodup_peaks.narrowPeak/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 4304
Total background sequences = 20245
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-189	-4.370e+02	26.42%	10.45%	331.4bp (224.7bp)	REB1(MacIsaac)/Yeast(0.993) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-100	-2.304e+02	32.35%	18.73%	353.2bp (260.0bp)	RSC30/MA0375.1/Jaspar(0.872) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-97	-2.242e+02	40.04%	25.40%	360.4bp (212.6bp)	hb/dmmpmm(SeSiMCMC)/fly(0.910) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-50	-1.156e+02	9.23%	4.02%	274.1bp (227.4bp)	IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer(0.974) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-47	-1.096e+02	34.81%	24.85%	393.7bp (219.5bp)	TATA-box/SacCer-Promoters/Homer(0.880) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-36	-8.300e+01	6.95%	3.09%	379.3bp (241.4bp)	ERF6/MA1006.1/Jaspar(0.858) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-31	-7.159e+01	9.23%	4.93%	329.6bp (247.0bp)	SeqBias: CA-repeat(0.868) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-30	-7.092e+01	33.49%	25.53%	364.2bp (215.9bp)	Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer(0.768) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-30	-6.920e+01	27.05%	19.79%	393.8bp (220.4bp)	TRB2/MA1073.1/Jaspar(0.812) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-26	-6.053e+01	29.14%	22.14%	376.8bp (233.3bp)	Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer(0.966) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-26	-6.021e+01	18.15%	12.46%	346.8bp (212.1bp)	GAGA-repeat/Arabidopsis-Promoters/Homer(0.796) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-24	-5.748e+01	5.58%	2.66%	298.6bp (223.0bp)	OPI1/Literature(Harbison)/Yeast(0.926) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-22	-5.134e+01	10.23%	6.28%	337.8bp (204.4bp)	TOD6?/SacCer-Promoters/Homer(0.941) More Information \| Similar Motifs Found	motif file (matrix)
14		1e-20	-4.797e+01	4.67%	2.23%	321.6bp (210.4bp)	SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast(0.890) More Information \| Similar Motifs Found	motif file (matrix)
15		1e-17	-4.058e+01	5.00%	2.63%	385.7bp (203.1bp)	RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast(0.941) More Information \| Similar Motifs Found	motif file (matrix)
16		1e-13	-3.029e+01	14.97%	11.24%	305.6bp (183.9bp)	cad/dmmpmm(Down)/fly(0.847) More Information \| Similar Motifs Found	motif file (matrix)
17 *		1e-10	-2.378e+01	1.35%	0.50%	304.3bp (234.6bp)	RDS1/RDS1_H2O2Hi/[](Harbison)/Yeast(0.762) More Information \| Similar Motifs Found	motif file (matrix)
18 *		1e-8	-2.011e+01	22.05%	18.48%	362.9bp (202.8bp)	UPC2/MA0411.1/Jaspar(0.783) More Information \| Similar Motifs Found	motif file (matrix)
19 *		1e-4	-1.024e+01	13.34%	11.37%	329.1bp (201.6bp)	PB0148.1_Mtf1_2/Jaspar(0.813) More Information \| Similar Motifs Found	motif file (matrix)