Information for 11-TGCACGSM (Motif 8)


Reverse Opposite:

p-value:1e-30
log p-value:-7.092e+01
Information Content per bp:1.617
Number of Target Sequences with motif1441.0
Percentage of Target Sequences with motif33.49%
Number of Background Sequences with motif5169.0
Percentage of Background Sequences with motif25.53%
Average Position of motif in Targets453.1 +/- 364.2bp
Average Position of motif in Background291.9 +/- 215.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TGCACGSM-
TBGCACGCAA

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TGCACGSM
--CACGCA

NAC058/MA0938.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TGCACGSM-
-ACACGCAA

RCS1(MacIsaac)/Yeast

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCACGSM
TGCACCC-

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGCACGSM
ANTGCACCC-

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TGCACGSM-
-GCACGTNC

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TGCACGSM-
-GCACGTAY

AFT2(MacIsaac)/Yeast

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCACGSM
TGCACCC-

T11I18.17/MA0936.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGCACGSM-
-ACACGCAA

NAC080/MA0939.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGCACGSM-
-ACACGCAA