Information for 15-SGGTTCGA (Motif 12)


Reverse Opposite:

p-value:1e-24
log p-value:-5.748e+01
Information Content per bp:1.930
Number of Target Sequences with motif240.0
Percentage of Target Sequences with motif5.58%
Number of Background Sequences with motif537.9
Percentage of Background Sequences with motif2.66%
Average Position of motif in Targets374.9 +/- 298.6bp
Average Position of motif in Background304.6 +/- 223.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

OPI1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:SGGTTCGA
-GATTCGA

OPI1(MacIsaac)/Yeast

Match Rank:2
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:SGGTTCGA
CGGTTCG-

OPI1/MA0349.1/Jaspar

Match Rank:3
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:SGGTTCGA
CGGTTCG-

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:4
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-SGGTTCGA
TCGGNNCGA

STB4(MacIsaac)/Yeast

Match Rank:5
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-SGGTTCGA
TCGGNNCGA

YER051W(MacIsaac)/Yeast

Match Rank:6
Score:0.75
Offset:3
Orientation:forward strand
Alignment:SGGTTCGA-
---TTCGAA

XBP1/MA0414.1/Jaspar

Match Rank:7
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:SGGTTCGA-
--NCTCGAG

Unknown3/Arabidopsis-Promoters/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-SGGTTCGA-
CCGGTTTART

SMZ/MA0553.1/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:SGGTTCGA--
--GTACGAGG

lin-14/MA0261.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:SGGTTCGA
GTGTTC--