Information for 9-CGGCCGGC (Motif 6)


Reverse Opposite:

p-value:1e-36
log p-value:-8.300e+01
Information Content per bp:1.797
Number of Target Sequences with motif299.0
Percentage of Target Sequences with motif6.95%
Number of Background Sequences with motif625.3
Percentage of Background Sequences with motif3.09%
Average Position of motif in Targets499.2 +/- 379.3bp
Average Position of motif in Background295.0 +/- 241.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERF6/MA1006.1/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:CGGCCGGC--
CTGCCGGCGT

RDS1(MacIsaac)/Yeast

Match Rank:2
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CGGCCGGC
CGGCCG--

RDS1/MA0361.1/Jaspar

Match Rank:3
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CGGCCGGC
CGGCCGA-

ERF105/MA1000.1/Jaspar

Match Rank:4
Score:0.83
Offset:1
Orientation:forward strand
Alignment:CGGCCGGC-
-TGCCGGCG

YLL054C/MA0429.1/Jaspar

Match Rank:5
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCGGC
TCGGCCG--

ERF098/MA0999.1/Jaspar

Match Rank:6
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CGGCCGGC
CCGCCGCC

RDS1/RDS1_H2O2Hi/[](Harbison)/Yeast

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCGGC
TCGGCCGA-

ERF13/MA1004.1/Jaspar

Match Rank:8
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CGGCCGGC-
-CGCCGCCA

ERF096/MA0998.1/Jaspar

Match Rank:9
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CGGCCGGC--
CCGCCGCCAT

ERF4/MA0992.1/Jaspar

Match Rank:10
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGGCCGGC
CCGCCGCC