Information for 25-ATAAGAAA (Motif 19)


Reverse Opposite:

p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.847
Number of Target Sequences with motif574.0
Percentage of Target Sequences with motif13.34%
Number of Background Sequences with motif2301.6
Percentage of Background Sequences with motif11.37%
Average Position of motif in Targets441.1 +/- 329.1bp
Average Position of motif in Background294.2 +/- 201.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--ATAAGAAA----
AAATAAGAAAAAAC

PEND/MA0127.1/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-ATAAGAAA-
AATAAGAAGT

GLN3/GLN3_RAPA/8-GZF3,11-GLN3(Harbison)/Yeast

Match Rank:3
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-ATAAGAAA
GATAAGATA

GLN3(MacIsaac)/Yeast

Match Rank:4
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--ATAAGAAA
AGATAAGATA

DAL82/DAL82_SM/3-DAL82(Harbison)/Yeast

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ATAAGAAA
GATAAGA--

hb/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--ATAAGAAA
CAATAAAAAA

AZF1/MA0277.1/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ATAAGAAA
AAAAAGAAA

Mecom/MA0029.1/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATAAGAAA---
AAGATAAGATAACA

PB0021.1_Gata3_1/Jaspar

Match Rank:9
Score:0.70
Offset:-9
Orientation:forward strand
Alignment:---------ATAAGAAA-----
TTTTTAGAGATAAGAAATAAAG

GZF3/Literature(Harbison)/Yeast

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATAAGAAA
GATAAG---