Information for 23-ACTCGGCC (Motif 17)


Reverse Opposite:

p-value:1e-10
log p-value:-2.378e+01
Information Content per bp:1.530
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif101.7
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets324.4 +/- 304.3bp
Average Position of motif in Background328.7 +/- 234.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RDS1/RDS1_H2O2Hi/[](Harbison)/Yeast

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:ACTCGGCC--
--TCGGCCGA

IME1/MA0320.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ACTCGGCC-
-CTCGGCGG

IME1(MacIsaac)/Yeast

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACTCGGCC-
-CTCGGCGG

RDS1/MA0361.1/Jaspar

Match Rank:4
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:ACTCGGCC-
--NCGGCCG

RDS1(MacIsaac)/Yeast

Match Rank:5
Score:0.72
Offset:3
Orientation:forward strand
Alignment:ACTCGGCC-
---CGGCCG

YLL054C/MA0429.1/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:ACTCGGCC-
--TCGGCCG

SKN7/MA0381.1/Jaspar

Match Rank:7
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:ACTCGGCC
--NTGGCC

CHA4/MA0283.1/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ACTCGGCC
TCTCCGCC

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ACTCGGCC-
-CTAGGCCT

CMTA3/MA0970.1/Jaspar

Match Rank:10
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ACTCGGCC
NNNACGCGG--