Homer de novo Motif Results (/srv/scratch/training_camp/tc2016/user23/analysis/motifs/Cz_2_S17_R1.trimmed.nodup_peaks.narrowPeak/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 4391
Total background sequences = 18861
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-204	-4.707e+02	27.76%	11.00%	339.3bp (255.3bp)	REB1(MacIsaac)/Yeast(0.994) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-97	-2.254e+02	28.92%	16.21%	341.9bp (297.5bp)	RSC30/MA0375.1/Jaspar(0.859) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-79	-1.826e+02	40.80%	27.54%	339.6bp (229.6bp)	PB0182.1_Srf_2/Jaspar(0.898) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-47	-1.104e+02	42.28%	31.76%	353.0bp (228.2bp)	TATA-box/SacCer-Promoters/Homer(0.885) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-46	-1.079e+02	10.02%	4.73%	319.7bp (261.3bp)	TYE7(MacIsaac)/Yeast(0.996) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-30	-6.997e+01	11.29%	6.56%	354.1bp (276.1bp)	ERF6/MA1006.1/Jaspar(0.862) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-30	-6.935e+01	37.23%	29.15%	366.8bp (238.8bp)	Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer(0.844) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-29	-6.806e+01	7.38%	3.71%	333.3bp (224.8bp)	SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast(0.918) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-27	-6.408e+01	31.51%	24.17%	376.9bp (243.3bp)	z/dmmpmm(Down)/fly(0.752) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-27	-6.316e+01	11.22%	6.72%	363.3bp (244.6bp)	MSN2(MacIsaac)/Yeast(0.884) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-27	-6.303e+01	29.53%	22.42%	392.4bp (242.7bp)	OPI1/Literature(Harbison)/Yeast(0.871) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-24	-5.728e+01	17.87%	12.41%	320.1bp (275.3bp)	SeqBias: CA-repeat(0.859) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-22	-5.236e+01	15.62%	10.71%	329.6bp (198.8bp)	cad/dmmpmm(Down)/fly(0.876) More Information \| Similar Motifs Found	motif file (matrix)
14		1e-20	-4.693e+01	22.47%	16.96%	324.4bp (232.9bp)	GMEB2/MA0862.1/Jaspar(0.809) More Information \| Similar Motifs Found	motif file (matrix)
15		1e-16	-3.747e+01	25.87%	20.65%	329.1bp (236.3bp)	INO2/INO2_YPD/1-INO4,2-INO2(Harbison)/Yeast(0.799) More Information \| Similar Motifs Found	motif file (matrix)
16		1e-13	-3.207e+01	5.17%	3.01%	319.2bp (229.0bp)	RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast(0.941) More Information \| Similar Motifs Found	motif file (matrix)