Information for 18-ACACACAC (Motif 12)


Reverse Opposite:

p-value:1e-24
log p-value:-5.728e+01
Information Content per bp:1.624
Number of Target Sequences with motif785.0
Percentage of Target Sequences with motif17.87%
Number of Background Sequences with motif2340.8
Percentage of Background Sequences with motif12.41%
Average Position of motif in Targets445.1 +/- 320.1bp
Average Position of motif in Background317.7 +/- 275.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.86
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: CA-repeat

Match Rank:1
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-ACACACAC-
CACACACACA

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.83
Offset:-4
Orientation:forward strand
Alignment:----ACACACAC----
AGCGGCACACACGCAA

MET31(MacIsaac)/Yeast

Match Rank:3
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-ACACACAC
GCCACACC-

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--ACACACAC--
GGACACACCCCC

daf-12/MA0538.1/Jaspar

Match Rank:5
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---ACACACAC----
NACGCACACACACAC

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--ACACACAC--
GGCCACACCCAN

AFT2/MA0270.1/Jaspar

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:ACACACAC-
-CACACCCC

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--ACACACAC-
GGCCACACCCA

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ACACACAC-
GCCACACCCA

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ACACACAC
-CACGCA-