Information for 15-TAAGGGGC (Motif 10)


Reverse Opposite:

p-value:1e-27
log p-value:-6.316e+01
Information Content per bp:1.923
Number of Target Sequences with motif493.0
Percentage of Target Sequences with motif11.22%
Number of Background Sequences with motif1267.6
Percentage of Background Sequences with motif6.72%
Average Position of motif in Targets442.7 +/- 363.3bp
Average Position of motif in Background308.4 +/- 244.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MSN2(MacIsaac)/Yeast

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:TAAGGGGC
-AAGGGGC

MSN4(MacIsaac)/Yeast

Match Rank:2
Score:0.84
Offset:1
Orientation:forward strand
Alignment:TAAGGGGC
-AAGGGGG

MSN4/Literature(Harbison)/Yeast

Match Rank:3
Score:0.82
Offset:1
Orientation:forward strand
Alignment:TAAGGGGC
-AAGGGGN

RPH1/MA0372.1/Jaspar

Match Rank:4
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TAAGGGGC
TTAGGGGT

MSN2/MSN2_H2O2Hi/1-MSN2(Harbison)/Yeast

Match Rank:5
Score:0.80
Offset:1
Orientation:forward strand
Alignment:TAAGGGGC--
-AAGGGGCGG

GIS1/MA0306.1/Jaspar

Match Rank:6
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TAAGGGGC
NTTAGGGGT

MSN4/MA0342.1/Jaspar

Match Rank:7
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TAAGGGGC
--AGGGG-

RGM1/MA0366.1/Jaspar

Match Rank:8
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TAAGGGGC
--AGGGG-

REI1/MA0364.1/Jaspar

Match Rank:9
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TAAGGGGC
TCAGGGG-

RPH1/Literature(Harbison)/Yeast

Match Rank:10
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---TAAGGGGC
CCTTAAGGGG-