Information for 2-GCCGCGCG (Motif 2)


Reverse Opposite:

p-value:1e-97
log p-value:-2.254e+02
Information Content per bp:1.526
Number of Target Sequences with motif1270.0
Percentage of Target Sequences with motif28.92%
Number of Background Sequences with motif3057.9
Percentage of Background Sequences with motif16.21%
Average Position of motif in Targets469.2 +/- 341.9bp
Average Position of motif in Background307.0 +/- 297.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC30/MA0375.1/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GCCGCGCG
CGCGCGCG

RSC3/MA0374.1/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:GCCGCGCG
-NNGCGCG

Tcfl5/MA0632.1/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GCCGCGCG--
GGCACGTGCC

SUT1(MacIsaac)/Yeast

Match Rank:4
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GCCGCGCG
-CCCCGCG

SUT1/MA0399.1/Jaspar

Match Rank:5
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GCCGCGCG
-CCCCGCG

Hes1/MA1099.1/Jaspar

Match Rank:6
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GCCGCGCG--
GGCACGCGTC

MBP1/MA0329.1/Jaspar

Match Rank:7
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GCCGCGCG--
---ACGCGTA

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:8
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GCCGCGCG---
---GCGCGCTA

h/MA0449.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCCGCGCG--
GGCACGTGCC

h/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GCCGCGCG----
NNGGCACGCGCCAN