Information for 12-YCCGTACA (Motif 8)


Reverse Opposite:

p-value:1e-29
log p-value:-6.806e+01
Information Content per bp:1.730
Number of Target Sequences with motif324.0
Percentage of Target Sequences with motif7.38%
Number of Background Sequences with motif699.0
Percentage of Background Sequences with motif3.71%
Average Position of motif in Targets419.6 +/- 333.3bp
Average Position of motif in Background316.2 +/- 224.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:1
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-YCCGTACA-
ACCCGTACAT

SFP1(MacIsaac)/Yeast

Match Rank:2
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-YCCGTACA-
ACCCGTACAT

FHL1(MacIsaac)/Yeast

Match Rank:3
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-YCCGTACA-
ATCCGTACAT

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:4
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--YCCGTACA-
CACCCGTACAT

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.86
Offset:-5
Orientation:forward strand
Alignment:-----YCCGTACA------
TCGCGTCCGTACAGGAGGG

SPL14/MA0586.1/Jaspar

Match Rank:6
Score:0.86
Offset:-5
Orientation:forward strand
Alignment:-----YCCGTACA------
TCGCGTCCGTACAGGAGGG

POPTR_0002s00440g/MA0955.1/Jaspar

Match Rank:7
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:YCCGTACA
-CCGTACN

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:8
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--YCCGTACA
CACCCGTACA

RAP1/MA0359.1/Jaspar

Match Rank:9
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--YCCGTACA
CACCCATACA

SPL5/MA1059.1/Jaspar

Match Rank:10
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:YCCGTACA-
NCCGTACNN