Information for 11-CCCCTCTC (Motif 7)


Reverse Opposite:

p-value:1e-30
log p-value:-6.935e+01
Information Content per bp:1.594
Number of Target Sequences with motif1635.0
Percentage of Target Sequences with motif37.23%
Number of Background Sequences with motif5499.5
Percentage of Background Sequences with motif29.15%
Average Position of motif in Targets449.0 +/- 366.8bp
Average Position of motif in Background306.1 +/- 238.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:1
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:CCCCTCTC-
-CTCTCTCY

TDA9/MA0431.1/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CCCCTCTC
ACCCCGCAC

YGR067C/MA0425.1/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CCCCTCTC-----
ACCCCACTTTTTCA

MSN4/MA0342.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CCCCTCTC
CCCCT---

SUT1?/SacCer-Promoters/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCCCTCTC
CCCCGCGC

Trl/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CCCCTCTC--
TTGCTCTCTC

Trl/MA0205.1/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCCCTCTC--
TTGCTCTCTC

RGM1/MA0366.1/Jaspar

Match Rank:8
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CCCCTCTC
CCCCT---

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CCCCTCTC
CCCCCCCC

YER130C/MA0423.1/Jaspar

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CCCCTCTC
ACCCCTATT